RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 PIN4Q9Y237 131 aaKnown RBP15□□□□□ -0.01
LIMS2-206ENST00000409754 CITO14578 2027 aa15□□□□□ -0.01
LIMS2-206ENST00000409754 CCDC151A5D8V7 595 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 MIF4GDA9UHW6 222 aaKnown RBP14.99□□□□□ -0.01
LIMS2-206ENST00000409754 PAEPP09466 180 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 MRPS6P82932 125 aaKnown RBP14.99□□□□□ -0.01
LIMS2-206ENST00000409754 PTPROQ16827 1216 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 TRIM71Q2Q1W2 868 aaKnown RBP14.99□□□□□ -0.01
LIMS2-206ENST00000409754 LIN9Q5TKA1 542 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 CCDC70Q6NSX1 233 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 WDR93Q6P2C0 686 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 TMCO3Q6UWJ1 677 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 ALKAL1Q6UXT8 129 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 RSPH3Q86UC2 560 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 RASGEF1CQ8N431 466 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 VWCEQ96DN2 955 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 HPDLQ96IR7 371 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 TSPAN18Q96SJ8 248 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 TRIM6Q9C030 488 aaPredicted RBP14.99□□□□□ -0.01
LIMS2-206ENST00000409754 ZNF518BQ9C0D4 1074 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 CNTN3Q9P232 1028 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 PCDHGC3Q9UN70 934 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 M0QZ92 97 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 CEP104O60308 925 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 CFHP08603 1231 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 MCM3P25205 808 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
LIMS2-206ENST00000409754 ZBTB6Q15916 424 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 FAM47CQ5HY64 1035 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 UBXN11Q5T124 520 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 TRAF7Q6Q0C0 670 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 RPAINQ86UA6 219 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 PASD1Q8IV76 773 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 TTC39CQ8N584 583 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 USP38Q8NB14 1042 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 HTATIP2Q9BUP3 242 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 TTC7AQ9ULT0 858 aaPredicted RBP14.99□□□□□ -0.01
LIMS2-206ENST00000409754 TRPV2Q9Y5S1 764 aa14.99□□□□□ -0.01
LIMS2-206ENST00000409754 TET1Q8NFU7 2136 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 PGRMC1O00264 195 aaKnown RBP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 RECQL4O94761 1208 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 SYN1P17600 705 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 RRM1P23921 792 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 BRD2P25440 801 aaKnown RBP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 CDH5P33151 784 aaPredicted RBP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 GUCY2FP51841 1108 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 MLLT1Q03111 559 aaPredicted RBP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 PTPN11Q06124 597 aaPredicted RBP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 MESDQ14696 234 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 ZNF394Q53GI3 561 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 CC2D1AQ6P1N0 951 aaPredicted RBP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 SERINC5Q86VE9 423 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 UBL4BQ8N7F7 174 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 TMEM35BQ8NCS4 154 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 BEST2Q8NFU1 509 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 HNRNPLLQ8WVV9 542 aaKnown RBP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 RUBCNQ92622 972 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 ZSWIM1Q9BR11 485 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 SDCBP2Q9H190 292 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 WNT8AQ9H1J5 351 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 CARD9Q9H257 536 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 NXF3Q9H4D5 531 aaKnown RBP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 SMYD3Q9H7B4 428 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 RBM12Q9NTZ6 932 aaKnown RBP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 ADAM22Q9P0K1 906 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 CHORDC1Q9UHD1 332 aaPredicted RBP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 TMEM59LQ9UK28 342 aa14.98□□□□□ -0.01
LIMS2-206ENST00000409754 ZMYND8Q9ULU4 1186 aaPredicted RBP14.98□□□□□ -0.01
LIMS2-206ENST00000409754 MED7O43513 233 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 CILPO75339 1184 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 CLTBP09497 229 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 COMTP21964 271 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 RAP1GAPP47736 663 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 TNNC1P63316 161 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 MYO1EQ12965 1108 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 PTP4A2Q12974 167 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 GLE1Q53GS7 698 aaKnown RBP14.97□□□□□ -0.01
LIMS2-206ENST00000409754 XKR4Q5GH76 650 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 FAM228AQ86W67 206 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 TMEM130Q8N3G9 435 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 WHAMMQ8TF30 809 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 ZMAT2Q96NC0 199 aaKnown RBP14.97□□□□□ -0.01
LIMS2-206ENST00000409754 C11orf70Q9BRQ4 267 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 OSBPL7Q9BZF2 842 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 UBQLN1Q9UMX0 589 aaKnown RBP14.97□□□□□ -0.01
LIMS2-206ENST00000409754 NOC2LQ9Y3T9 749 aaKnown RBP14.97□□□□□ -0.01
LIMS2-206ENST00000409754 HES2Q9Y543 173 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 CDY2AQ9Y6F7 541 aa14.97□□□□□ -0.01
LIMS2-206ENST00000409754 TMEM110-MUSTN1A8MSY1 372 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 KIAA0355O15063 1070 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 ERLIN1O75477 346 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 ZRANB2O95218 330 aaKnown RBP eCLIP14.96□□□□□ -0.01
LIMS2-206ENST00000409754 CALB1P05937 261 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 KCNE1P15382 129 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 MMP8P22894 467 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 CTNNA2P26232 953 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 RAD23BP54727 409 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 CDH8P55286 799 aa14.96□□□□□ -0.01
LIMS2-206ENST00000409754 VSNL1P62760 191 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms