RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 FAM196AQ6ZSG2 479 aa10.02□□□□□ -0.8
CSMD1-202ENST00000400186 RIN3Q8TB24 985 aa10.02□□□□□ -0.8
CSMD1-202ENST00000400186 MED15Q96RN5 788 aa10.02□□□□□ -0.8
CSMD1-202ENST00000400186 SMAD5Q99717 465 aaKnown RBP10.02□□□□□ -0.8
CSMD1-202ENST00000400186 PSMD14O00487 310 aa10.02□□□□□ -0.8
CSMD1-202ENST00000400186 PDE5AO76074 875 aa10.02□□□□□ -0.8
CSMD1-202ENST00000400186 NUP107P57740 925 aa10.02□□□□□ -0.8
CSMD1-202ENST00000400186 DDI1Q8WTU0 396 aa10.02□□□□□ -0.8
CSMD1-202ENST00000400186 IRX2Q9BZI1 471 aaPredicted RBP10.02□□□□□ -0.8
CSMD1-202ENST00000400186 RNF146Q9NTX7 359 aa10.02□□□□□ -0.8
CSMD1-202ENST00000400186 CPDO75976 1380 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 TNPO2O14787 897 aaKnown RBP10.02□□□□□ -0.81
CSMD1-202ENST00000400186 ITGA8P53708 1063 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 TUFT1Q9NNX1 390 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 MYCP01106 439 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-202ENST00000400186 P4HBP07237 508 aaKnown RBP10.02□□□□□ -0.81
CSMD1-202ENST00000400186 CPA2P48052 419 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 LRRC8DQ7L1W4 858 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 OR2W6PQ8NHA6 318 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 MTERF3Q96E29 417 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 SMARCAL1Q9NZC9 954 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-202ENST00000400186 GYS1P13807 737 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 PCSK7Q16549 785 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 HAUS6Q7Z4H7 955 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 DCP1AQ9NPI6 582 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-202ENST00000400186 EVPLLA8MZ36 301 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 PWP1Q13610 501 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 NR1I3Q14994 352 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 ALX1Q15699 326 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 DALRD3Q5D0E6 543 aaKnown RBP10.02□□□□□ -0.81
CSMD1-202ENST00000400186 ADCK2Q7Z695 626 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 PRDM5Q9NQX1 630 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-202ENST00000400186 PAK5Q9P286 719 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 DTNAQ9Y4J8 743 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 H2AFYO75367 372 aaKnown RBP10.02□□□□□ -0.81
CSMD1-202ENST00000400186 CRKP46108 304 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 LAMC2Q13753 1193 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 VEPH1Q14D04 833 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 SMTNL2Q2TAL5 461 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 GLMNQ92990 594 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 COQ7Q99807 217 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 SLC7A5P2Q9GIP4 190 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 SYBUQ9NX95 663 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 ZDHHC9Q9Y397 364 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 SSU72P8A0A1W2PR75 194 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 GRAP2O75791 330 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 SRGNP10124 158 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 GALCP54803 685 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 GEMIN4P57678 1058 aaKnown RBP10.02□□□□□ -0.81
CSMD1-202ENST00000400186 SNRNP35Q16560 246 aaKnown RBP10.02□□□□□ -0.81
CSMD1-202ENST00000400186 QRICH1Q2TAL8 776 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 EFL1Q7Z2Z2 1120 aaKnown RBP10.02□□□□□ -0.81
CSMD1-202ENST00000400186 SLC10A4Q96EP9 437 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 MTA3Q9BTC8 594 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 APOL5Q9BWW9 433 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 WDR35Q9P2L0 1181 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 MROH7-TTC4A0A0A0MT08 1334 aa10.02□□□□□ -0.81
CSMD1-202ENST00000400186 TDP2O95551 362 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 HNRNPH1P31943 449 aaKnown RBP10.01□□□□□ -0.81
CSMD1-202ENST00000400186 ITIH4Q14624 930 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 KBTBD12Q3ZCT8 623 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 ZCWPW2Q504Y3 356 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 RAVER2Q9HCJ3 691 aaKnown RBP10.01□□□□□ -0.81
CSMD1-202ENST00000400186 TRPC7Q9HCX4 862 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 HOXC10Q9NYD6 342 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 ABT1Q9ULW3 272 aaKnown RBP10.01□□□□□ -0.81
CSMD1-202ENST00000400186 ADGRA3Q8IWK6 1321 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 RGS4P49798 205 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 WDR72Q3MJ13 1102 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 SCFD2Q8WU76 684 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 CAAP1Q9H8G2 361 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 RIC8BQ9NVN3 520 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 PSMC3P17980 439 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 TWF1Q12792 350 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 SLC39A10Q9ULF5 831 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 SLC16A1P53985 500 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 P3H2Q8IVL5 708 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 HPS3Q969F9 1004 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 PABPC5Q96DU9 382 aaKnown RBP10.01□□□□□ -0.81
CSMD1-202ENST00000400186 SRPK1Q96SB4 655 aaKnown RBP10.01□□□□□ -0.81
CSMD1-202ENST00000400186 FAM153AQ9UHL3 310 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 PLEKHG2Q9H7P9 1386 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 UBXN8O00124 270 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 EYA4O95677 639 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 UCHL3P15374 230 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 ZBTB10Q96DT7 871 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 HES6Q96HZ4 224 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 ZIM3Q96PE6 472 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 CD248Q9HCU0 757 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 MAGEA13PA6NCF6 341 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 PGK2P07205 417 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 MAPRE1Q15691 268 aaKnown RBP10.01□□□□□ -0.81
CSMD1-202ENST00000400186 ARMCX4Q5H9R4 360 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 CLEC17AQ6ZS10 378 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 FAM71DQ8N9W8 422 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 VPS37AQ8NEZ2 397 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 EPS8L2Q9H6S3 715 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 APPL1Q9UKG1 709 aa10.01□□□□□ -0.81
CSMD1-202ENST00000400186 CACNA1CQ13936 2221 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms