RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 CELF4Q9BZC1 486 aaKnown RBP16.1■□□□□ 0.17
COL25A1-201ENST00000399126 SPC25Q9HBM1 224 aa16.1■□□□□ 0.17
COL25A1-201ENST00000399126 SRRDQ9UH36 339 aa16.1■□□□□ 0.17
COL25A1-201ENST00000399126 CDY2AQ9Y6F7 541 aa16.1■□□□□ 0.17
COL25A1-201ENST00000399126 SSR1P43307 286 aaKnown RBP16.1■□□□□ 0.17
COL25A1-201ENST00000399126 GSCP56915 257 aaPredicted RBP16.1■□□□□ 0.17
COL25A1-201ENST00000399126 ZNF211Q13398 564 aaPredicted RBP16.1■□□□□ 0.17
COL25A1-201ENST00000399126 KYAT1Q16773 422 aa16.1■□□□□ 0.17
COL25A1-201ENST00000399126 ARRDC4Q8NCT1 418 aa16.1■□□□□ 0.17
COL25A1-201ENST00000399126 SLC7A5Q01650 507 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 TCEAL1Q15170 157 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 CCSAPQ6IQ19 270 aaPredicted RBP16.09■□□□□ 0.17
COL25A1-201ENST00000399126 KCNV2Q8TDN2 545 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 RPGRIP1Q96KN7 1286 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 ELOVL4Q9GZR5 314 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 CCDC189A1A4V9 331 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 MEIS3P2A8K0S8 358 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 MTA2O94776 668 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 CHRNA1P02708 482 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 CD19P15391 556 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 RAD23BP54727 409 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 MRPS6P82932 125 aaKnown RBP16.09■□□□□ 0.17
COL25A1-201ENST00000399126 POU5F1Q01860 360 aaKnown RBP16.09■□□□□ 0.17
COL25A1-201ENST00000399126 PTP4A2Q12974 167 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 DNAJC21Q5F1R6 531 aaKnown RBP16.09■□□□□ 0.17
COL25A1-201ENST00000399126 TAF2Q6P1X5 1199 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 ALKAL1Q6UXT8 129 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 WDTC1Q8N5D0 677 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 KLHDC9Q8NEP7 349 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 AP1M1Q9BXS5 423 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 GOLGA2P5Q9HBQ8 144 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 ADAM22Q9P0K1 906 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 DMGDHQ9UI17 866 aaKnown RBP16.09■□□□□ 0.17
COL25A1-201ENST00000399126 ANAPC7Q9UJX3 599 aa16.09■□□□□ 0.17
COL25A1-201ENST00000399126 KPNA6O60684 536 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 CALRP27797 417 aaKnown RBP16.08■□□□□ 0.16
COL25A1-201ENST00000399126 VEGFBP49765 207 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 APLP1P51693 650 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 TTC31Q49AM3 519 aaPredicted RBP16.08■□□□□ 0.16
COL25A1-201ENST00000399126 C11orf63Q6NUN7 778 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 CC2D1AQ6P1N0 951 aaPredicted RBP16.08■□□□□ 0.16
COL25A1-201ENST00000399126 USP38Q8NB14 1042 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 SMG8Q8ND04 991 aaKnown RBP16.08■□□□□ 0.16
COL25A1-201ENST00000399126 PARP2Q9UGN5 583 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 ITGA11Q9UKX5 1188 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 RAB21Q9UL25 225 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 IPPQ9Y573 584 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 CREB3O43889 395 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 YARSP54577 528 aaKnown RBP16.08■□□□□ 0.16
COL25A1-201ENST00000399126 NFX1Q12986 1120 aaKnown RBP16.08■□□□□ 0.16
COL25A1-201ENST00000399126 GSPT2Q8IYD1 628 aaKnown RBP16.08■□□□□ 0.16
COL25A1-201ENST00000399126 MMGT1Q8N4V1 131 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 SLC4A11Q8NBS3 891 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 TJP2Q9UDY2 1190 aa16.08■□□□□ 0.16
COL25A1-201ENST00000399126 ITGA4P13612 1032 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 RBP5P82980 135 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 ZBTB6Q15916 424 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 TWF2Q6IBS0 349 aaKnown RBP16.07■□□□□ 0.16
COL25A1-201ENST00000399126 DENND1BQ6P3S1 775 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 ADAT2Q7Z6V5 191 aaKnown RBP16.07■□□□□ 0.16
COL25A1-201ENST00000399126 SERINC5Q86VE9 423 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 CCDC97Q96F63 343 aaPredicted RBP16.07■□□□□ 0.16
COL25A1-201ENST00000399126 ST7Q9NRC1 585 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 UVRAGQ9P2Y5 699 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 CYTH4Q9UIA0 394 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 NR2E1Q9Y466 385 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 SH3BP5O60239 455 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 CILPO75339 1184 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 SOX4Q06945 474 aaPredicted RBP16.07■□□□□ 0.16
COL25A1-201ENST00000399126 DPH6Q7L8W6 267 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 SESTD1Q86VW0 696 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 PBKQ96KB5 322 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 ZFP42Q96MM3 310 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 VRTNQ9H8Y1 702 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 PLEKHA5Q9HAU0 1116 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 TRMT13Q9NUP7 481 aaKnown RBP16.07■□□□□ 0.16
COL25A1-201ENST00000399126 ARGLU1Q9NWB6 273 aaPredicted RBP16.07■□□□□ 0.16
COL25A1-201ENST00000399126 CNTN3Q9P232 1028 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 CACNG4Q9UBN1 327 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 ST3GAL5Q9UNP4 418 aa16.07■□□□□ 0.16
COL25A1-201ENST00000399126 SMIM28A0A1B0GU29 152 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 HCRTO43612 131 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 HMGCRP04035 888 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 MYBL2P10244 700 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 AXLP30530 894 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 ATICP31939 592 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 NKX3-2P78367 333 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 ITIH3Q06033 890 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 SETDB1Q15047 1291 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 PCBP1Q15365 356 aaKnown RBP eCLIP16.06■□□□□ 0.16
COL25A1-201ENST00000399126 MAP3K21Q5TCX8 1036 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 TRIM72Q6ZMU5 477 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 PHF13Q86YI8 300 aaPredicted RBP16.06■□□□□ 0.16
COL25A1-201ENST00000399126 KRT12Q99456 494 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 AGO3Q9H9G7 860 aaKnown RBP16.06■□□□□ 0.16
COL25A1-201ENST00000399126 NME7Q9Y5B8 376 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 ZSCAN5CA6NGD5 496 aaPredicted RBP16.06■□□□□ 0.16
COL25A1-201ENST00000399126 PPP1R12AO14974 1030 aaPredicted RBP16.06■□□□□ 0.16
COL25A1-201ENST00000399126 ZRANB2O95218 330 aaKnown RBP eCLIP16.06■□□□□ 0.16
COL25A1-201ENST00000399126 IGFBP6P24592 240 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms