RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 AMHR2Q16671 573 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 CROCCP2Q86T23 111 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 KIAA0319LQ8IZA0 1049 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 EXD1Q8NHP7 514 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 HPDLQ96IR7 371 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 TRIM6Q9C030 488 aaPredicted RBP17.11■□□□□ 0.33
SNX6-202ENST00000396526 FAM49AQ9H0Q0 323 aaPredicted RBP17.11■□□□□ 0.33
SNX6-202ENST00000396526 HMGB1P1B2RPK0 211 aaPredicted RBP17.11■□□□□ 0.33
SNX6-202ENST00000396526 IQCF3P0C7M6 154 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 GJC1P36383 396 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 KATNAL2Q8IYT4 538 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 RCOR2Q8IZ40 523 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 CENPHQ9H3R5 247 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 SETD4Q9NVD3 440 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 KIAA1257Q9ULG3 409 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 CFHP08603 1231 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 CDR1P51861 262 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 LMNB2Q03252 620 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 NPLOC4Q8TAT6 608 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 TRIM7Q9C029 511 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 VRTNQ9H8Y1 702 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 PLEKHA5Q9HAU0 1116 aa17.11■□□□□ 0.33
SNX6-202ENST00000396526 EVPLQ92817 2033 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 TSPAN1O60635 241 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 CDH5P33151 784 aaPredicted RBP17.1■□□□□ 0.33
SNX6-202ENST00000396526 SLMAPQ14BN4 828 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 SLC10A6Q3KNW5 377 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 KIF12Q96FN5 646 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 BCO2Q9BYV7 579 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 DPP3Q9NY33 737 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 ASIC3Q9UHC3 531 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 POLIQ9UNA4 740 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 PTPN22Q9Y2R2 807 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 TMEM191CA6NGB0 347 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 GRM5P41594 1212 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 ZNF157P51786 506 aaPredicted RBP17.1■□□□□ 0.33
SNX6-202ENST00000396526 LRRC38Q5VT99 294 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 TMEM192Q8IY95 271 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 C3orf20Q8ND61 904 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 ATL2Q8NHH9 583 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 IPO4Q8TEX9 1081 aaKnown RBP17.1■□□□□ 0.33
SNX6-202ENST00000396526 PTPN18Q99952 460 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 OSBPL8Q9BZF1 889 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 ATP8A1Q9Y2Q0 1164 aa17.1■□□□□ 0.33
SNX6-202ENST00000396526 A6NJR5 290 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 KRT14P02533 472 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 ACTN2P35609 894 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 PTGIRP43119 386 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 CPT1AP50416 773 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 HADHQ16836 314 aaKnown RBP17.09■□□□□ 0.33
SNX6-202ENST00000396526 NOTUMQ6P988 496 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 ZNF365Q70YC5 407 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 DDX27Q96GQ7 796 aaKnown RBP17.09■□□□□ 0.33
SNX6-202ENST00000396526 TMEM176AQ96HP8 235 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 DDX56Q9NY93 547 aaKnown RBP17.09■□□□□ 0.33
SNX6-202ENST00000396526 VDRP11473 427 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 CYP2C9P11712 490 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 ATF7P17544 494 aaPredicted RBP17.09■□□□□ 0.33
SNX6-202ENST00000396526 ECHS1P30084 290 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 PTPN11Q06124 597 aaPredicted RBP17.09■□□□□ 0.33
SNX6-202ENST00000396526 STILQ15468 1287 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 KIZQ2M2Z5 673 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 TMC3Q7Z5M5 1100 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 BBOF1Q8ND07 529 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 CCDC114Q96M63 670 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 HEXIM2Q96MH2 286 aaKnown RBP17.09■□□□□ 0.33
SNX6-202ENST00000396526 MCEEQ96PE7 176 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 SIX4Q9UIU6 781 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 IVLP07476 585 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 CPNE8Q86YQ8 564 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 C1orf54Q8WWF1 131 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 KATNAL1Q9BW62 490 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 DERAQ9Y315 318 aa17.09■□□□□ 0.33
SNX6-202ENST00000396526 SMIM35A0A1B0GVV1 85 aa17.08■□□□□ 0.33
SNX6-202ENST00000396526 XPOTO43592 962 aaKnown RBP17.08■□□□□ 0.33
SNX6-202ENST00000396526 TJP3O95049 919 aa17.08■□□□□ 0.33
SNX6-202ENST00000396526 GNAT1P11488 350 aa17.08■□□□□ 0.33
SNX6-202ENST00000396526 KRT3P12035 628 aa17.08■□□□□ 0.33
SNX6-202ENST00000396526 DESP17661 470 aa17.08■□□□□ 0.33
SNX6-202ENST00000396526 SNX16P57768 344 aa17.08■□□□□ 0.33
SNX6-202ENST00000396526 SLC27A1Q6PCB7 646 aa17.08■□□□□ 0.33
SNX6-202ENST00000396526 HOOK3Q86VS8 718 aa17.08■□□□□ 0.33
SNX6-202ENST00000396526 COPS2P61201 443 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 PSMC1P62191 440 aaKnown RBP17.08■□□□□ 0.32
SNX6-202ENST00000396526 LLGL1Q15334 1064 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 DENND2CQ68D51 928 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 LLGL2Q6P1M3 1020 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 TLK2Q86UE8 772 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 BEST2Q8NFU1 509 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 SLCO2A1Q92959 643 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 ATP6V1G3Q96LB4 118 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 CALCOCO1Q9P1Z2 691 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 BARX2Q9UMQ3 279 aaPredicted RBP17.08■□□□□ 0.32
SNX6-202ENST00000396526 KAT6AQ92794 2004 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 RALAP11233 206 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 AXLP30530 894 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 RGS2P41220 211 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 KCNJ1P48048 391 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 CDH8P55286 799 aa17.08■□□□□ 0.32
SNX6-202ENST00000396526 INHBEP58166 350 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms