RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 GEMIN4P57678 1058 aaKnown RBP17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 OCRLQ01968 901 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 NFX1Q12986 1120 aaKnown RBP17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 MDH1BQ5I0G3 518 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 FAM102BQ5T8I3 360 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 ARMC3Q5W041 872 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 CCDC62Q6P9F0 684 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 MTHFD1LQ6UB35 978 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 CEP128Q6ZU80 1094 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 CENPUQ71F23 418 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 KBTBD2Q8IY47 623 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 PTCD3Q96EY7 689 aaKnown RBP17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 TMEM121Q9BTD3 319 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 TSSK1BQ9BXA7 367 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 TMEM120AQ9BXJ8 343 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 ZC3H12CQ9C0D7 883 aaKnown RBP17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 RPL26L1Q9UNX3 145 aaKnown RBP17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 AMPD1P23109 780 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 NEK3P51956 506 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 JAG1P78504 1218 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 LAMB3Q13751 1172 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 APLFQ8IW19 511 aaPredicted RBP17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 FAM161BQ96MY7 647 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 TMEM8AQ9HCN3 771 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 PI4KBQ9UBF8 816 aa17.3■□□□□ 0.36
EFEMP1-202ENST00000394555 PGM1P36871 562 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 GPC3P51654 580 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 SLC18A1P54219 525 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 RASIP1Q5U651 963 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 TTC17Q96AE7 1141 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 FAM81BQ96LP2 452 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 ZHX2Q9Y6X8 837 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 MYPNQ86TC9 1320 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 MAGEA13PA6NCF6 341 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 TLR3O15455 904 aaKnown RBP17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 HNRNPCL1O60812 293 aaKnown RBP17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 GPX6P59796 221 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 LMNB2Q03252 620 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 TMEM179Q6ZVK1 233 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 IRAK4Q9NWZ3 460 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 ZNFX1Q9P2E3 1918 aaKnown RBP17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 ALOX15BO15296 676 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 PSTPIP1O43586 416 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 DSG3P32926 999 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 AP1B1Q10567 949 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 MFSD7Q6UXD7 560 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 C3orf62Q6ZUJ4 267 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 NLRX1Q86UT6 975 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 PYROXD1Q8WU10 500 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 GMCL1Q96IK5 515 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 FOXP3Q9BZS1 431 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 AVENQ9NQS1 362 aaPredicted RBP17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 PCMTD2Q9NV79 361 aa17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 SAE1Q9UBE0 346 aaPredicted RBP17.29■□□□□ 0.36
EFEMP1-202ENST00000394555 RNF8O76064 485 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 BAG2O95816 211 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 KRT1P04264 644 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 RARRES1P49788 294 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 LIN9Q5TKA1 542 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 KATNAL2Q8IYT4 538 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 EXD1Q8NHP7 514 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 IFT43Q96FT9 208 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 CYTH2Q99418 400 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 PAFAH2Q99487 392 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 ZNF184Q99676 751 aaPredicted RBP17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 KRT82Q9NSB4 513 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 SLC24A2Q9UI40 661 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 BBOX1O75936 387 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 GSTA2P09210 222 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 ECE1P42892 770 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 CRKP46108 304 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 DYNLT1P63172 113 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 HIF1AQ16665 826 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 SPOPLQ6IQ16 392 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 SH3BP5LQ7L8J4 393 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 C12orf56Q8IXR9 622 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 ZFAND2BQ8WV99 257 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 GORASP1Q9BQQ3 440 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 C1orf112Q9NSG2 853 aa17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 STX18Q9P2W9 335 aaKnown RBP17.28■□□□□ 0.36
EFEMP1-202ENST00000394555 BGNP21810 368 aa17.27■□□□□ 0.36
EFEMP1-202ENST00000394555 STAT2P52630 851 aa17.27■□□□□ 0.36
EFEMP1-202ENST00000394555 GTF2BQ00403 316 aa17.27■□□□□ 0.36
EFEMP1-202ENST00000394555 MAMLD1Q13495 774 aa17.27■□□□□ 0.36
EFEMP1-202ENST00000394555 ZYXQ15942 572 aaKnown RBP17.27■□□□□ 0.36
EFEMP1-202ENST00000394555 RHPN2Q8IUC4 686 aa17.27■□□□□ 0.36
EFEMP1-202ENST00000394555 TTC1Q99614 292 aa17.27■□□□□ 0.36
EFEMP1-202ENST00000394555 RABGEF1Q9UJ41 708 aa17.27■□□□□ 0.36
EFEMP1-202ENST00000394555 B2RBV5 119 aa17.27■□□□□ 0.35
EFEMP1-202ENST00000394555 H3BRJ5 948 aa17.27■□□□□ 0.35
EFEMP1-202ENST00000394555 MYL2P10916 166 aa17.27■□□□□ 0.35
EFEMP1-202ENST00000394555 GLRA2P23416 452 aa17.27■□□□□ 0.35
EFEMP1-202ENST00000394555 RPL7AP62424 266 aaKnown RBP17.27■□□□□ 0.35
EFEMP1-202ENST00000394555 CUL3Q13618 768 aa17.27■□□□□ 0.35
EFEMP1-202ENST00000394555 ALCAMQ13740 583 aa17.27■□□□□ 0.35
EFEMP1-202ENST00000394555 EAPPQ56P03 285 aaPredicted RBP17.27■□□□□ 0.35
EFEMP1-202ENST00000394555 FAM182AQ5T1J6 154 aa17.27■□□□□ 0.35
EFEMP1-202ENST00000394555 FAM196AQ6ZSG2 479 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms