RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 GJA8P48165 433 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 THUMPD3Q9BV44 507 aaKnown RBP13.96□□□□□ -0.17
USP49-203ENST00000394253 TASP1Q9H6P5 420 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 MARCOQ9UEW3 520 aaPredicted RBP13.96□□□□□ -0.17
USP49-203ENST00000394253 PHF11Q9UIL8 331 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 LRCH1Q9Y2L9 728 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 PLCG1P19174 1290 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 ZFP1Q6P2D0 407 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 MAPRE3Q9UPY8 281 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 CYP2D7A0A087X1C5 515 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 RTN3O95197 1032 aaPredicted RBP13.96□□□□□ -0.17
USP49-203ENST00000394253 CCNE1P24864 410 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 OLFML2AQ68BL7 652 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 CYB5D1Q6P9G0 228 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 AP1S3Q96PC3 154 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 COQ6Q9Y2Z9 468 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 TRIM17Q9Y577 477 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 C3orf70A6NLC5 250 aaPredicted RBP13.96□□□□□ -0.17
USP49-203ENST00000394253 CLTBP09497 229 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 FAM83EQ2M2I3 478 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 CAMK1DQ8IU85 385 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 MINDY2Q8NBR6 621 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 FAM172AQ8WUF8 416 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 CAMKK2Q96RR4 588 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 GRID1Q9ULK0 1009 aa13.96□□□□□ -0.17
USP49-203ENST00000394253 PAICSP22234 425 aaKnown RBP13.96□□□□□ -0.18
USP49-203ENST00000394253 PPP2R1BP30154 601 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 TTKP33981 857 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 DPP9Q86TI2 863 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 PIK3C3Q8NEB9 887 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 IL1RL2Q9HB29 575 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 HPS4Q9NQG7 708 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 SPASTQ9UBP0 616 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 MAP1BP46821 2468 aaKnown RBP13.96□□□□□ -0.18
USP49-203ENST00000394253 KCNN4O15554 427 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 APOC1P02654 83 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 IL2RBP14784 551 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 UBE2Q1Q7Z7E8 422 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 VMP1Q96GC9 406 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 EFCAB1Q9HAE3 211 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 TPRKBQ9Y3C4 175 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 FHOD1Q9Y613 1164 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 LGALS16A8MUM7 142 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 KPNA6O60684 536 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 SRGAP2O75044 1071 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 TCF4P15884 667 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 CALB2P22676 271 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 USF2Q15853 346 aaPredicted RBP13.96□□□□□ -0.18
USP49-203ENST00000394253 TTC30AQ86WT1 665 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 EID3Q8N140 333 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 FRMD6Q96NE9 622 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 EHD3Q9NZN3 535 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 GSTK1Q9Y2Q3 226 aa13.96□□□□□ -0.18
USP49-203ENST00000394253 BMP10O95393 424 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 CCNA2P20248 432 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 DLGAP5Q15398 846 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 DDB1Q16531 1140 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 TIGD7Q6NT04 549 aaPredicted RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 ZCCHC8Q6NZY4 707 aaKnown RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 C11orf57Q6ZUT1 292 aaPredicted RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 SLC9A6Q92581 669 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 ACCSLQ4AC99 568 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 ANKRD40Q6AI12 368 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 PRMT9Q6P2P2 845 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 MZT2AQ6P582 158 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 IRAK3Q9Y616 596 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 V9GYQ6 96 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 TNKSO95271 1327 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 ABCA5Q8WWZ7 1642 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 POLBP06746 335 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 SPRP35270 261 aaPredicted RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 YIPF2Q9BWQ6 316 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 BAIAP2Q9UQB8 552 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 GRIN2BQ13224 1484 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 LSM1O15116 133 aaKnown RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 ATP9AO75110 1047 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 ZCCHC18P0CG32 403 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 S100A2P29034 98 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 KCTD2Q14681 263 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 TMEM270Q6UE05 265 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 PAIP1Q9H074 479 aaKnown RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 KLHL1Q9NR64 748 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 SCGNO76038 276 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 ITGA3P26006 1051 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 YWHAQP27348 245 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 GCLCP48506 637 aaPredicted RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 OLR1P78380 273 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 POU4F1Q01851 419 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 KRT28Q7Z3Y7 464 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 HEMGNQ9BXL5 484 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 ROPN1BQ9BZX4 212 aaPredicted RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 ILKAPQ9H0C8 392 aaPredicted RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 ROPN1Q9HAT0 212 aaPredicted RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 AKAP7Q9P0M2 348 aaPredicted RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 BLMP54132 1417 aaPredicted RBP13.95□□□□□ -0.18
USP49-203ENST00000394253 PTK6Q13882 451 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 SNX17Q15036 470 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 DSTYKQ6XUX3 929 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 LARGE2Q8N3Y3 721 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 RSL24D1Q9UHA3 163 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms