RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TWF2Q6IBS0 349 aaKnown RBP15.36■□□□□ 0.05
CCDC50-201ENST00000392455 GRAPLQ8TC17 118 aaPredicted RBP15.36■□□□□ 0.05
CCDC50-201ENST00000392455 NLRP1Q9C000 1473 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 RACGAP1Q9H0H5 632 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 GH2P01242 217 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 SFNP31947 248 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 KCNH2Q12809 1159 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 DNAJC9Q8WXX5 260 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 PCDHA6Q9UN73 950 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 PCDHA8Q9Y5H6 950 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 MYH6P13533 1939 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 PLEKHF1Q96S99 279 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 BPIFA3Q9BQP9 254 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 CNOT8Q9UFF9 292 aaKnown RBP15.36■□□□□ 0.05
CCDC50-201ENST00000392455 PRMT3O60678 531 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 HPGDP15428 266 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 NUP93Q8N1F7 819 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 MED15Q96RN5 788 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 HDHD2Q9H0R4 259 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 TMEM51Q9NW97 253 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 COMMD9Q9P000 198 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 SLC25A13Q9UJS0 675 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 ADGRL2O95490 1459 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 MPOP05164 745 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 TKTP29401 623 aaKnown RBP15.35■□□□□ 0.05
CCDC50-201ENST00000392455 VHLP40337 213 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 GLMNQ92990 594 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 TSR3Q9UJK0 312 aaKnown RBP15.35■□□□□ 0.05
CCDC50-201ENST00000392455 USP15Q9Y4E8 981 aaPredicted RBP15.35■□□□□ 0.05
CCDC50-201ENST00000392455 ATP1A1P05023 1023 aaKnown RBP15.35■□□□□ 0.05
CCDC50-201ENST00000392455 SERPINB8P50452 374 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 RESTQ13127 1097 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 PSMC3IPQ9P2W1 217 aaPredicted RBP15.35■□□□□ 0.05
CCDC50-201ENST00000392455 AP3M1Q9Y2T2 418 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 UGGT1Q9NYU2 1555 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 RPN2P04844 631 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 GPR1P46091 355 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 GPC3P51654 580 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 PTPN12Q05209 780 aaKnown RBP15.35■□□□□ 0.05
CCDC50-201ENST00000392455 TERF2Q15554 542 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 TMEM179Q6ZVK1 233 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 SUGP1Q8IWZ8 645 aaKnown RBP15.35■□□□□ 0.05
CCDC50-201ENST00000392455 CRELD1Q96HD1 420 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 MNTQ99583 582 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 MAGEA13PA6NCF6 341 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 GUCY1A2P33402 732 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 CYP27A1Q02318 531 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 YIPF2Q9BWQ6 316 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 CDC40O60508 579 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCDC50-201ENST00000392455 SPRP35270 261 aaPredicted RBP15.35■□□□□ 0.05
CCDC50-201ENST00000392455 GMFBP60983 142 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 XXYLT1Q8NBI6 393 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 SLC20A1Q8WUM9 679 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 PTPRN2Q92932 1015 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 ARHGEF38Q9NXL2 777 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 ATP7BP35670 1465 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 PALMO75781 387 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 CRYMQ14894 314 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 KRT31Q15323 416 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 TMA16Q96EY4 203 aaKnown RBP15.35■□□□□ 0.05
CCDC50-201ENST00000392455 RMDN3Q96TC7 470 aa15.35■□□□□ 0.05
CCDC50-201ENST00000392455 ZFRQ96KR1 1074 aaKnown RBP15.34■□□□□ 0.05
CCDC50-201ENST00000392455 AIFM3Q96NN9 605 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 BSDC1Q9NW68 430 aaPredicted RBP15.34■□□□□ 0.05
CCDC50-201ENST00000392455 EIF3LQ9Y262 564 aaKnown RBP15.34■□□□□ 0.05
CCDC50-201ENST00000392455 PDS5AQ29RF7 1337 aaKnown RBP15.34■□□□□ 0.05
CCDC50-201ENST00000392455 ZC3H4Q9UPT8 1303 aaKnown RBP15.34■□□□□ 0.05
CCDC50-201ENST00000392455 EXTL3O43909 919 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 FLT3P36888 993 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 NPY2RP49146 381 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 RAD23AP54725 363 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 LRIG3Q6UXM1 1119 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 TTLL6Q8N841 843 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 CYFIP2Q96F07 1278 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 COA1Q9GZY4 146 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 PIH1D3Q9NQM4 214 aaKnown RBP15.34■□□□□ 0.05
CCDC50-201ENST00000392455 LATS2Q9NRM7 1088 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 USP17L5A8MUK1 530 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 ERVV-1B6SEH8 477 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 C21orf2O43822 256 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 CACNB3P54284 484 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 NKX1-1Q15270 411 aaPredicted RBP15.34■□□□□ 0.05
CCDC50-201ENST00000392455 PRMT9Q6P2P2 845 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 DGKHQ86XP1 1220 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 CATSPER2Q96P56 530 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 HEG1Q9ULI3 1381 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 PABPC1P11940 636 aaKnown RBP15.34■□□□□ 0.05
CCDC50-201ENST00000392455 MTA1Q13330 715 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 PPP1R18Q6NYC8 613 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 CCDC195A0A1B0GUA6 201 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 FAM47DPA6NHR8 397 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 ALOX15P16050 662 aaPredicted RBP15.34■□□□□ 0.05
CCDC50-201ENST00000392455 PRELPP51888 382 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 BNC1Q01954 994 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 RCOR2Q8IZ40 523 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.34■□□□□ 0.056e-7■■□□□ 12.3
CCDC50-201ENST00000392455 PGK2P07205 417 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 IFNAR1P17181 557 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 AKT1P31749 480 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 ATP12AP54707 1039 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms