RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 GPR25O00155 361 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 ACKR2O00590 384 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 ERLIN2O94905 339 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 OSBPP22059 807 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 IVDP26440 423 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 SSR1P43307 286 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 RAP1GAPP47736 663 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 OGDHQ02218 1023 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 GRM1Q13255 1194 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 KLF1Q13351 362 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 ORC1Q13415 861 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 HIC1Q14526 733 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 PWP2Q15269 919 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 PRUNE1Q86TP1 453 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 FEZF2Q8TBJ5 459 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 VCPIP1Q96JH7 1222 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 MPHOSPH6Q99547 160 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 DCLK3Q9C098 648 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 NIF3L1Q9GZT8 377 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 CDT1Q9H211 546 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 SMARCAD1Q9H4L7 1026 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 NXF1Q9UBU9 619 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 PLXNB2O15031 1838 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 TCRBV5S1A1TA0A578 114 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 SMIM23A6NLE4 172 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 PI4K2BG5E9Z4 385 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 TULP2O00295 520 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 GAS2O43903 313 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 C22orf31O95567 290 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 NUDT17P0C025 328 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 INSRRP14616 1297 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 EPHX2P34913 555 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 CHKAP35790 457 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 AP3M2P53677 418 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 CDH8P55286 799 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 ARHGAP1Q07960 439 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 TRPC3Q13507 836 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 SGSM1Q2NKQ1 1148 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 ZNF699Q32M78 642 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 ODF2Q5BJF6 829 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 CYP4A22Q5TCH4 519 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 AGBL2Q5U5Z8 902 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 TXNRD3NBQ6F5E7 133 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 MAMDC4Q6UXC1 1216 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 ARMCX2Q7L311 632 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 FASTKD5Q7L8L6 764 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 CCDC25Q86WR0 208 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 MCEEQ96PE7 176 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 PLVAPQ9BX97 442 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 C2orf40Q9H1Z8 148 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 MROH8Q9H579 483 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 MRPL47Q9HD33 250 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 AAASQ9NRG9 546 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 PARVAQ9NVD7 372 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 TJP2Q9UDY2 1190 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 TLDC2A0PJX2 215 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 TMEM191CA6NGB0 347 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 F8VP50 259 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 MYO1CO00159 1063 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 HBP1O60381 514 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 KRT19P08727 400 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 TMEM191BP0C7N4 346 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 VPS41P49754 854 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 TTLL4Q14679 1199 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 PTGISQ16647 500 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 SPDYCQ5MJ68 293 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 TAPT1Q6NXT6 567 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 RHOT1Q8IXI2 618 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 SLCO2A1Q92959 643 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 ACSF2Q96CM8 615 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 PWWP2AQ96N64 755 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 DDX23Q9BUQ8 820 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 EPN3Q9H201 632 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 SPON1Q9HCB6 807 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 DNAJC17Q9NVM6 304 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 SIX4Q9UIU6 781 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 PPME1Q9Y570 386 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 RIPK2O43353 540 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 PSTPIP1O43586 416 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 NFICP08651 508 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 ZNF286BP0CG31 522 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 POTEJP0CG39 1038 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 KRT10P13645 584 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 PPP2R2AP63151 447 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 EAPPQ56P03 285 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 DENND2CQ68D51 928 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 DPY19L2Q6NUT2 758 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 KATNAL2Q8IYT4 538 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 MDM1Q8TC05 714 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 UPF1Q92900 1129 aaKnown RBP eCLIP8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 TLCD1Q96CP7 247 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 CPB2Q96IY4 423 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 OSBPL8Q9BZF1 889 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 SDCBP2Q9H190 292 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 PPANQ9NQ55 473 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 MTRF1LQ9UGC7 380 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 PARP2Q9UGN5 583 aa8.44□□□□□ -1.06
PDLIM5-204ENST00000380176 LIMD1Q9UGP4 676 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms