RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SLC24A2Q9UI40 661 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 ZHX2Q9Y6X8 837 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 RARRES1P49788 294 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 TATDN1Q6P1N9 297 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 SV2AQ7L0J3 742 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 MIER3Q7Z3K6 550 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 PASD1Q8IV76 773 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 EXD1Q8NHP7 514 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 POMGNT1Q8WZA1 660 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 MCUR1Q96AQ8 359 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 TCF4P15884 667 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 CRKP46108 304 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 SEPT7Q16181 437 aaKnown RBP17.41■□□□□ 0.38
TRIM39-201ENST00000376656 MON1BQ7L1V2 547 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 VPS52Q8N1B4 723 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 HAUS1Q96CS2 278 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 KIFC3Q9BVG8 833 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 TAS2R1Q9NYW7 299 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 FAM198AQ9UFP1 575 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 WASF2Q9Y6W5 498 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 C2orf71A6NGG8 1288 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 TJP3O95049 919 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 VIL1P09327 827 aaKnown RBP17.41■□□□□ 0.38
TRIM39-201ENST00000376656 ATF7P17544 494 aaPredicted RBP17.41■□□□□ 0.38
TRIM39-201ENST00000376656 DSG3P32926 999 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 GAD2Q05329 585 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 NFX1Q12986 1120 aaKnown RBP17.41■□□□□ 0.38
TRIM39-201ENST00000376656 EFHC2Q5JST6 749 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 RFX8Q6ZV50 586 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 CCNJLQ8IV13 435 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.41■□□□□ 0.38
TRIM39-201ENST00000376656 SYNCQ9H7C4 482 aa17.41■□□□□ 0.38
TRIM39-201ENST00000376656 LOXHD1Q8IVV2 1947 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 CLUHO75153 1309 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 ZBED4O75132 1171 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 GH2P01242 217 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 SSTR1P30872 391 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 TFDP1Q14186 410 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 ZFYVE27Q5T4F4 411 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 RNASEH2BQ5TBB1 312 aaKnown RBP17.4■□□□□ 0.38
TRIM39-201ENST00000376656 ALLCQ8N6M5 410 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 FGD4Q96M96 766 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 TRIM55Q9BYV6 548 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 MANSC1Q9H8J5 431 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 KRT82Q9NSB4 513 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 RABGEF1Q9UJ41 708 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 A0A1B0GVG6 124 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 ARFIP2P53365 341 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 GEMIN4P57678 1058 aaKnown RBP17.4■□□□□ 0.38
TRIM39-201ENST00000376656 AP1B1Q10567 949 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 EAPPQ56P03 285 aaPredicted RBP17.4■□□□□ 0.38
TRIM39-201ENST00000376656 CENPUQ71F23 418 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 TTC7BQ86TV6 843 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 NLRX1Q86UT6 975 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 CFAP61Q8NHU2 1237 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 GATA6Q92908 595 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 KCNK13Q9HB14 408 aa17.4■□□□□ 0.38
TRIM39-201ENST00000376656 STX18Q9P2W9 335 aaKnown RBP17.4■□□□□ 0.38
TRIM39-201ENST00000376656 ZBTB16Q05516 673 aa17.39■□□□□ 0.38
TRIM39-201ENST00000376656 TRAF1Q13077 416 aa17.39■□□□□ 0.38
TRIM39-201ENST00000376656 MORF4L2Q15014 288 aa17.39■□□□□ 0.38
TRIM39-201ENST00000376656 STMN2Q93045 179 aa17.39■□□□□ 0.38
TRIM39-201ENST00000376656 SKA1Q96BD8 255 aa17.39■□□□□ 0.38
TRIM39-201ENST00000376656 TRIM11Q96F44 468 aa17.39■□□□□ 0.38
TRIM39-201ENST00000376656 TRAPPC9Q96Q05 1148 aa17.39■□□□□ 0.38
TRIM39-201ENST00000376656 TMEM120AQ9BXJ8 343 aa17.39■□□□□ 0.38
TRIM39-201ENST00000376656 CYP1A1P04798 512 aaPredicted RBP17.39■□□□□ 0.37
TRIM39-201ENST00000376656 MAMLD1Q13495 774 aa17.39■□□□□ 0.37
TRIM39-201ENST00000376656 THOC5Q13769 683 aaKnown RBP17.39■□□□□ 0.37
TRIM39-201ENST00000376656 MFSD7Q6UXD7 560 aa17.39■□□□□ 0.37
TRIM39-201ENST00000376656 GSTA2P09210 222 aa17.39■□□□□ 0.37
TRIM39-201ENST00000376656 MTM1Q13496 603 aa17.39■□□□□ 0.37
TRIM39-201ENST00000376656 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.37
TRIM39-201ENST00000376656 DDX50Q9BQ39 737 aaKnown RBP17.39■□□□□ 0.37
TRIM39-201ENST00000376656 TSSK1BQ9BXA7 367 aa17.39■□□□□ 0.37
TRIM39-201ENST00000376656 SSU72Q9NP77 194 aaKnown RBP17.39■□□□□ 0.37
TRIM39-201ENST00000376656 MAGEA13PA6NCF6 341 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 SERPINB2P05120 415 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 P4HBP07237 508 aaKnown RBP17.38■□□□□ 0.37
TRIM39-201ENST00000376656 UBTFL6P0CB48 400 aaPredicted RBP17.38■□□□□ 0.37
TRIM39-201ENST00000376656 ITGB5P18084 799 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 AMPD1P23109 780 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 GLRA2P23416 452 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 STAT2P52630 851 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 RASA2Q15283 850 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 PPFIBP2Q8ND30 876 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 ZC3H12CQ9C0D7 883 aaKnown RBP17.38■□□□□ 0.37
TRIM39-201ENST00000376656 TLR3O15455 904 aaKnown RBP17.38■□□□□ 0.37
TRIM39-201ENST00000376656 MAP3K7O43318 606 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 IFNB1P01574 187 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 ESRRAP11474 423 aaPredicted RBP17.38■□□□□ 0.37
TRIM39-201ENST00000376656 ECE1P42892 770 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 NEK3P51956 506 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 NCKAP1LP55160 1127 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 CDK16Q00536 496 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 GCNT1Q02742 428 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 WDR72Q3MJ13 1102 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 PDCD7Q8N8D1 485 aaKnown RBP17.38■□□□□ 0.37
TRIM39-201ENST00000376656 MZB1Q8WU39 189 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 SLITRK1Q96PX8 696 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms