RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CYP4F22Q6NT55 531 aa26.54■■□□□ 1.84
CTSA-203ENST00000372459 EMBQ6PCB8 327 aa26.54■■□□□ 1.84
CTSA-203ENST00000372459 PLEKHA4Q9H4M7 779 aa26.54■■□□□ 1.84
CTSA-203ENST00000372459 SPC25Q9HBM1 224 aa26.54■■□□□ 1.84
CTSA-203ENST00000372459 PYGMP11217 842 aa26.53■■□□□ 1.84
CTSA-203ENST00000372459 MYO1EQ12965 1108 aa26.53■■□□□ 1.84
CTSA-203ENST00000372459 PAK2Q13177 524 aa26.53■■□□□ 1.84
CTSA-203ENST00000372459 AADACL2Q6P093 401 aa26.53■■□□□ 1.84
CTSA-203ENST00000372459 TAF2Q6P1X5 1199 aa26.53■■□□□ 1.84
CTSA-203ENST00000372459 TTC39CQ8N584 583 aa26.53■■□□□ 1.84
CTSA-203ENST00000372459 LHX5Q9H2C1 402 aa26.53■■□□□ 1.84
CTSA-203ENST00000372459 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.53■■□□□ 1.84
CTSA-203ENST00000372459 FEZF2Q8TBJ5 459 aa26.53■■□□□ 1.84
CTSA-203ENST00000372459 WHAMMQ8TF30 809 aa26.53■■□□□ 1.84
CTSA-203ENST00000372459 TMEM176AQ96HP8 235 aa26.53■■□□□ 1.84
CTSA-203ENST00000372459 AMACRQ9UHK6 382 aa26.53■■□□□ 1.84
CTSA-203ENST00000372459 ZSCAN5CA6NGD5 496 aaPredicted RBP26.52■■□□□ 1.84
CTSA-203ENST00000372459 TLR3O15455 904 aaKnown RBP26.52■■□□□ 1.84
CTSA-203ENST00000372459 ADAT2Q7Z6V5 191 aaKnown RBP26.52■■□□□ 1.84
CTSA-203ENST00000372459 ERICH1Q86X53 443 aa26.52■■□□□ 1.84
CTSA-203ENST00000372459 WDTC1Q8N5D0 677 aa26.52■■□□□ 1.84
CTSA-203ENST00000372459 SLC4A11Q8NBS3 891 aa26.52■■□□□ 1.84
CTSA-203ENST00000372459 UPF3AQ9H1J1 476 aaKnown RBP26.52■■□□□ 1.84
CTSA-203ENST00000372459 NXF3Q9H4D5 531 aaKnown RBP26.52■■□□□ 1.84
CTSA-203ENST00000372459 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.52■■□□□ 1.84
CTSA-203ENST00000372459 NR2E1Q9Y466 385 aa26.52■■□□□ 1.84
CTSA-203ENST00000372459 HES2Q9Y543 173 aa26.52■■□□□ 1.84
CTSA-203ENST00000372459 ESYT3A0FGR9 886 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 CARSP49589 748 aaKnown RBP26.51■■□□□ 1.83
CTSA-203ENST00000372459 PTPN11Q06124 597 aaPredicted RBP26.51■■□□□ 1.83
CTSA-203ENST00000372459 BEST2Q8NFU1 509 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 CASKIN2Q8WXE0 1202 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 IFT81Q8WYA0 676 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 GDAP1L1Q96MZ0 367 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 ZMAT2Q96NC0 199 aaKnown RBP26.51■■□□□ 1.83
CTSA-203ENST00000372459 ELOVL4Q9GZR5 314 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 CNTN3Q9P232 1028 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 LCMT1Q9UIC8 334 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 ZBTB6Q15916 424 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 DENND1BQ6P3S1 775 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 ALKAL1Q6UXT8 129 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 SND1Q7KZF4 910 aaKnown RBP eCLIP26.51■■□□□ 1.831e-7■■■□□ 14.8
CTSA-203ENST00000372459 EIF1ADQ8N9N8 165 aaKnown RBP26.51■■□□□ 1.83
CTSA-203ENST00000372459 TWNKQ96RR1 684 aa26.51■■□□□ 1.83
CTSA-203ENST00000372459 BARX2Q9UMQ3 279 aaPredicted RBP26.51■■□□□ 1.83
CTSA-203ENST00000372459 H3BQF6 201 aa26.5■■□□□ 1.83
CTSA-203ENST00000372459 SEPT4O43236 478 aa26.5■■□□□ 1.83
CTSA-203ENST00000372459 RECQL4O94761 1208 aa26.5■■□□□ 1.83
CTSA-203ENST00000372459 RARBP10826 455 aa26.5■■□□□ 1.83
CTSA-203ENST00000372459 PRKCZQ05513 592 aa26.5■■□□□ 1.83
CTSA-203ENST00000372459 INCA1Q0VD86 236 aa26.5■■□□□ 1.83
CTSA-203ENST00000372459 DNAJC24Q6P3W2 148 aa26.5■■□□□ 1.83
CTSA-203ENST00000372459 CAVIN3Q969G5 261 aa26.5■■□□□ 1.83
CTSA-203ENST00000372459 HMGXB4Q9UGU5 601 aa26.5■■□□□ 1.83
CTSA-203ENST00000372459 IP6K2Q9UHH9 426 aa26.5■■□□□ 1.83
CTSA-203ENST00000372459 STRIP2Q9ULQ0 834 aa26.5■■□□□ 1.83
CTSA-203ENST00000372459 PGK1P00558 417 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 MAN1A1P33908 653 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 TAP1Q03518 808 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 NOGQ13253 232 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 NNTQ13423 1086 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 SLC13A5Q86YT5 568 aaPredicted RBP26.49■■□□□ 1.83
CTSA-203ENST00000372459 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.49■■□□□ 1.833e-6■■■■■ 50.8
CTSA-203ENST00000372459 CELF4Q9BZC1 486 aaKnown RBP26.49■■□□□ 1.83
CTSA-203ENST00000372459 CXCL16Q9H2A7 254 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 ERVK-5Q9HDB9 667 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 PSD3Q9NYI0 1048 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 GTF2IRD1Q9UHL9 959 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 MTUS1Q9ULD2 1270 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 NFU1Q9UMS0 254 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 TRIP11Q15643 1979 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 TCRBV5S1A1TA0A578 114 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 KIF3CO14782 793 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 VDRP11473 427 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 ORC1Q13415 861 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 CUL1Q13616 776 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 CXCL17Q6UXB2 119 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 APOL6Q9BWW8 343 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.49■■□□□ 1.83
CTSA-203ENST00000372459 HPCAL4Q9UM19 191 aa26.49■■□□□ 1.83
CTSA-203ENST00000372459 M0QZ92 97 aa26.48■■□□□ 1.83
CTSA-203ENST00000372459 PSTPIP1O43586 416 aa26.48■■□□□ 1.83
CTSA-203ENST00000372459 NKX3-2P78367 333 aa26.48■■□□□ 1.83
CTSA-203ENST00000372459 NBPF20Q3BBV1 942 aa26.48■■□□□ 1.83
CTSA-203ENST00000372459 LRRC52Q8N7C0 313 aa26.48■■□□□ 1.83
CTSA-203ENST00000372459 EXOC4Q96A65 974 aa26.48■■□□□ 1.83
CTSA-203ENST00000372459 TSPAN18Q96SJ8 248 aa26.48■■□□□ 1.83
CTSA-203ENST00000372459 UBQLN1Q9UMX0 589 aaKnown RBP26.48■■□□□ 1.83
CTSA-203ENST00000372459 TMEM191CA6NGB0 347 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 BHMG1C9JSJ3 638 aaPredicted RBP26.47■■□□□ 1.83
CTSA-203ENST00000372459 TTI1O43156 1089 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 PHF2O75151 1096 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 AKAP5P24588 427 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 UBXN11Q5T124 520 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 RHOT1Q8IXI2 618 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 HEXIM2Q96MH2 286 aaKnown RBP26.47■■□□□ 1.83
CTSA-203ENST00000372459 TUBGCP4Q9UGJ1 667 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 UTP11Q9Y3A2 253 aaKnown RBP26.47■■□□□ 1.83
CTSA-203ENST00000372459 SCN10AQ9Y5Y9 1956 aa26.47■■□□□ 1.83
CTSA-203ENST00000372459 ERICH4A6NGS2 130 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms