RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ATP2C1P98194 919 aaPredicted RBP13□□□□□ -0.33
HCFC1-202ENST00000369984 ALDH6A1Q02252 535 aaKnown RBP13□□□□□ -0.33
HCFC1-202ENST00000369984 TMEM117Q9H0C3 514 aa13□□□□□ -0.33
HCFC1-202ENST00000369984 TRIM39Q9HCM9 518 aa13□□□□□ -0.33
HCFC1-202ENST00000369984 ZKSCAN7Q9P0L1 754 aaPredicted RBP13□□□□□ -0.33
HCFC1-202ENST00000369984 B2RBV5 119 aa13□□□□□ -0.33
HCFC1-202ENST00000369984 TRIM66O15016 1216 aa13□□□□□ -0.33
HCFC1-202ENST00000369984 SASH1O94885 1247 aa13□□□□□ -0.33
HCFC1-202ENST00000369984 CHI3L2Q15782 390 aa13□□□□□ -0.33
HCFC1-202ENST00000369984 GPR141Q7Z602 305 aa13□□□□□ -0.33
HCFC1-202ENST00000369984 RTKN2Q8IZC4 609 aa13□□□□□ -0.33
HCFC1-202ENST00000369984 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.33
HCFC1-202ENST00000369984 CCT8L1PA6NM43 557 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 ALDH1A1P00352 501 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 TPP2P29144 1249 aaPredicted RBP12.99□□□□□ -0.33
HCFC1-202ENST00000369984 VHLP40337 213 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 RASGRP2Q7LDG7 609 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 RIBC1Q8N443 379 aaPredicted RBP12.99□□□□□ -0.33
HCFC1-202ENST00000369984 KRCC1Q9NPI7 259 aaPredicted RBP12.99□□□□□ -0.33
HCFC1-202ENST00000369984 DNALI1O14645 258 aaPredicted RBP12.99□□□□□ -0.33
HCFC1-202ENST00000369984 RCN1Q15293 331 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 CNGA2Q16280 664 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 C11orf96Q7Z7L8 435 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 RTL3Q8N8U3 475 aaKnown RBP12.99□□□□□ -0.33
HCFC1-202ENST00000369984 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
HCFC1-202ENST00000369984 SYNDIG1Q9H7V2 258 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 CACNA2D2Q9NY47 1150 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 KYNUQ16719 465 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 YAF2Q8IY57 180 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 ANKRD49Q8WVL7 239 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 SPATA16Q9BXB7 569 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 AATKQ6ZMQ8 1374 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 CYBBP04839 570 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 NUDT2P50583 147 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 USP11P51784 963 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 PWP1Q13610 501 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 RIN3Q8TB24 985 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 WRNIP1Q96S55 665 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 TUFT1Q9NNX1 390 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 CDC42BPAQ5VT25 1732 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 TRIM13O60858 407 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 PTRHD1Q6GMV3 140 aaKnown RBP12.99□□□□□ -0.33
HCFC1-202ENST00000369984 TRMT2AQ8IZ69 625 aaKnown RBP12.99□□□□□ -0.33
HCFC1-202ENST00000369984 DDHD1Q8NEL9 900 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 CAAP1Q9H8G2 361 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 SLC16A3O15427 465 aaKnown RBP12.99□□□□□ -0.33
HCFC1-202ENST00000369984 IL31Q6EBC2 164 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 CIAPIN1Q6FI81 312 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 SETD3Q86TU7 594 aaPredicted RBP12.99□□□□□ -0.33
HCFC1-202ENST00000369984 ZNF786Q8N393 782 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 KCTD17Q8N5Z5 321 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 HERC5Q9UII4 1024 aaKnown RBP12.99□□□□□ -0.33
HCFC1-202ENST00000369984 AP4S1Q9Y587 144 aa12.99□□□□□ -0.33
HCFC1-202ENST00000369984 LRRIQ3A6PVS8 624 aaPredicted RBP12.98□□□□□ -0.33
HCFC1-202ENST00000369984 RGS4P49798 205 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 COPAP53621 1224 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 KCNB1Q14721 858 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 LRRC8DQ7L1W4 858 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 ZNF335Q9H4Z2 1342 aaPredicted RBP12.98□□□□□ -0.33
HCFC1-202ENST00000369984 SPRP35270 261 aaPredicted RBP12.98□□□□□ -0.33
HCFC1-202ENST00000369984 NCKAP1LP55160 1127 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 LMBRD2Q68DH5 695 aaPredicted RBP12.98□□□□□ -0.33
HCFC1-202ENST00000369984 ARHGEF40Q8TER5 1519 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 PGK2P07205 417 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 ARHGEF7Q14155 803 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 SMTNL2Q2TAL5 461 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 FUT11Q495W5 492 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 LAYNQ6UX15 382 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 PABPC5Q96DU9 382 aaKnown RBP12.98□□□□□ -0.33
HCFC1-202ENST00000369984 SPRTNQ9H040 489 aaPredicted RBP12.98□□□□□ -0.33
HCFC1-202ENST00000369984 EEF2KO00418 725 aaKnown RBP12.98□□□□□ -0.33
HCFC1-202ENST00000369984 KLHL24Q6TFL4 600 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 KRT35Q92764 455 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 APOL5Q9BWW9 433 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 BICRAQ9NZM4 1560 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 WDR72Q3MJ13 1102 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 SHC4Q6S5L8 630 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 VPS37AQ8NEZ2 397 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 GRID1Q9ULK0 1009 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 CROCCQ5TZA2 2017 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 TSPAN9O75954 239 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 EIF2B5Q13144 721 aaKnown RBP12.98□□□□□ -0.33
HCFC1-202ENST00000369984 TRIM10Q9UDY6 481 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 RCAN1P53805 252 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 CALML6Q8TD86 181 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 ZBTB10Q96DT7 871 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 UVRAGQ9P2Y5 699 aa12.98□□□□□ -0.33
HCFC1-202ENST00000369984 ZBTB22O15209 634 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 ARL4DP49703 201 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 TMEM132DQ14C87 1099 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 TERB1Q8NA31 727 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 RBM12Q9NTZ6 932 aaKnown RBP12.97□□□□□ -0.33
HCFC1-202ENST00000369984 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 HAUS6Q7Z4H7 955 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 SPASTQ9UBP0 616 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 RGS7P49802 495 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 ARL10Q8N8L6 244 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 OR2W6PQ8NHA6 318 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 USP33Q8TEY7 942 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms