RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 MEA1Q16626 185 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 ZNF362Q5T0B9 420 aaPredicted RBP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CCDC81Q6ZN84 652 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 RUFY3Q7L099 469 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 ADHFE1Q8IWW8 467 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 SLFN12Q8IYM2 578 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 TTLL11Q8NHH1 800 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 SMARCC2Q8TAQ2 1214 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 GDAP1Q8TB36 358 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 AGR3Q8TD06 166 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 NSMCE1Q8WV22 266 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 COL26A1Q96A83 441 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CLIC6Q96NY7 704 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 PSKH2Q96QS6 385 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 SDF4Q9BRK5 362 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 DDX23Q9BUQ8 820 aaKnown RBP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 MIS12Q9H081 205 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CD93Q9NPY3 652 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 DDX19AQ9NUU7 478 aaKnown RBP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 NKIRAS2Q9NYR9 191 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 TTC7AQ9ULT0 858 aaPredicted RBP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 FRMPD2Q68DX3 1309 aaPredicted RBP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 MROH5Q6ZUA9 1318 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 A0A1B0GVC2 190 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 USP27XA6NNY8 438 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 A8MVJ9 347 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CAPN14A8MX76 684 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 ZBTB24O43167 697 aaPredicted RBP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 FAM13AO94988 1023 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 GSK3AP49840 483 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 NR5A1Q13285 461 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 ABCB5Q2M3G0 1257 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 TRIM65Q6PJ69 517 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 XKR5Q6UX68 686 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 EPM2AIP1Q7L775 607 aaPredicted RBP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 SH3RF1Q7Z6J0 888 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CAND1Q86VP6 1230 aaKnown RBP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 TMEM57Q8N5G2 664 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 RNF10Q8N5U6 811 aaKnown RBP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 FAM169BQ8N8A8 192 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CHST13Q8NET6 341 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 OR52K2Q8NGK3 314 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CDC26Q8NHZ8 85 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 BCAS4Q8TDM0 211 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 XAGE3Q8WTP9 111 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 TRIB2Q92519 343 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 LPIN2Q92539 896 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 EDAQ92838 391 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 ATP6V0A1Q93050 837 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CRELD1Q96HD1 420 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 HIC2Q96JB3 615 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 RUNDC3BQ96NL0 473 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CAAP1Q9H8G2 361 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 HPF1Q9NWY4 346 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 KIAA1024Q9UPX6 916 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 GRIN2DO15399 1336 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 CLRN2A0PK11 232 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 AREL1O15033 823 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 TEX28O15482 410 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 KCNH1O95259 989 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 POLR3DP05423 398 aaPredicted RBP5.37□□□□□ -1.55
UBE3D-202ENST00000369746 APOA4P06727 396 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 P4HA1P13674 534 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 CES1P23141 567 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 PTPREP23469 700 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 HNF4AP41235 474 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 TYRO3Q06418 890 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 WDR43Q15061 677 aaKnown RBP eCLIP5.37□□□□□ -1.55
UBE3D-202ENST00000369746 NONOQ15233 471 aaKnown RBP eCLIP5.37□□□□□ -1.55
UBE3D-202ENST00000369746 TCEA2Q15560 299 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 IGSF11Q5DX21 431 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 TMEM240Q5SV17 173 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 E4F1Q66K89 784 aaPredicted RBP5.37□□□□□ -1.55
UBE3D-202ENST00000369746 POTEEQ6S8J3 1075 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ANGPTL8Q6UXH0 198 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 SRGAP1Q7Z6B7 1085 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ZNF554Q86TJ5 538 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 CERS5Q8N5B7 392 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ANKRD44Q8N8A2 993 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 UCMAQ8WVF2 138 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 GIMAP5Q96F15 307 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 PLEKHF1Q96S99 279 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 CARD6Q9BX69 1037 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 SMOC1Q9H4F8 434 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.37□□□□□ -1.55
UBE3D-202ENST00000369746 AGO2Q9UKV8 859 aaKnown RBP5.37□□□□□ -1.55
UBE3D-202ENST00000369746 DSEQ9UL01 958 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 SIP14410 1827 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 HTR3EA5X5Y0 456 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 CCDC169A6NNP5 214 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 NDUFAB1O14561 156 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 GALR2O43603 387 aaPredicted RBP5.37□□□□□ -1.55
UBE3D-202ENST00000369746 SMPD2O60906 423 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 WFS1O76024 890 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 POLBP06746 335 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ACTN1P12814 892 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 RARGP13631 454 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 CCND1P24385 295 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms