RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 CHN1P15882 459 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 PROZP22891 400 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 ASPAP45381 313 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 NFX1Q12986 1120 aaKnown RBP16.78■□□□□ 0.28
PHTF1-201ENST00000357783 CCNG2Q16589 344 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 CCDC38Q502W7 563 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 CCDC62Q6P9F0 684 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 EXOC8Q8IYI6 725 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 ACSF2Q96CM8 615 aaPredicted RBP16.78■□□□□ 0.28
PHTF1-201ENST00000357783 PPP1R16BQ96T49 567 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 TMEM109Q9BVC6 243 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 HOMER3Q9NSC5 361 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 AGTP01019 485 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 ATF7P17544 494 aaPredicted RBP16.77■□□□□ 0.28
PHTF1-201ENST00000357783 OGDHQ02218 1023 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 TFDP1Q14186 410 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 LONRF1Q17RB8 773 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 CDCA5Q96FF9 252 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 ANKRD36BP1Q96IX9 119 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 XPO6Q96QU8 1125 aaKnown RBP16.77■□□□□ 0.28
PHTF1-201ENST00000357783 XYLT2Q9H1B5 865 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 ADAM7Q9H2U9 754 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 FZD8Q9H461 694 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 SMARCAD1Q9H4L7 1026 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 PTPRHQ9HD43 1115 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 IVNS1ABPQ9Y6Y0 642 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 A0A087WUV0 522 aaPredicted RBP16.77■□□□□ 0.28
PHTF1-201ENST00000357783 CSDE1O75534 798 aaKnown RBP16.77■□□□□ 0.28
PHTF1-201ENST00000357783 MMP13P45452 471 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 AUHQ13825 339 aaKnown RBP16.77■□□□□ 0.28
PHTF1-201ENST00000357783 MICALCLQ6ZW33 695 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 GSTA5Q7RTV2 222 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 CROCCP2Q86T23 111 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 TADA2BQ86TJ2 420 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 SPATS2Q86XZ4 545 aaKnown RBP16.77■□□□□ 0.28
PHTF1-201ENST00000357783 WDTC1Q8N5D0 677 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 PPM1EQ8WY54 764 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 OPTNQ96CV9 577 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 JPH2Q9BR39 696 aaPredicted RBP16.77■□□□□ 0.28
PHTF1-201ENST00000357783 TRAIPQ9BWF2 469 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 CDT1Q9H211 546 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 NEU2Q9Y3R4 380 aa16.77■□□□□ 0.28
PHTF1-201ENST00000357783 CD19P15391 556 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 MBTD1Q05BQ5 628 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 GJC2Q5T442 439 aaPredicted RBP16.76■□□□□ 0.27
PHTF1-201ENST00000357783 MFSD7Q6UXD7 560 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 ERICH1Q86X53 443 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 SLITRK1Q96PX8 696 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 RNPEPQ9H4A4 650 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 KCNH4Q9UQ05 1017 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 TCRBV5S1A1TA0A578 114 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 IQCF3P0C7M6 154 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 CETN2P41208 172 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 ORC1Q13415 861 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 MOGSQ13724 837 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 ERMARDQ5T6L9 678 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 TXNRD3NBQ6F5E7 133 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 DENND1BQ6P3S1 775 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 DDX20Q9UHI6 824 aaKnown RBP16.76■□□□□ 0.27
PHTF1-201ENST00000357783 CEP83Q9Y592 693 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 GOLGA8SH3BPF8 625 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 MEFVO15553 781 aaPredicted RBP16.76■□□□□ 0.27
PHTF1-201ENST00000357783 HBP1O60381 514 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 OSBPP22059 807 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 LACTBP83111 547 aaPredicted RBP16.76■□□□□ 0.27
PHTF1-201ENST00000357783 IFT88Q13099 833 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 PPIL2Q13356 520 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 KYNUQ16719 465 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 IZUMO3Q5VZ72 239 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 CHADLQ6NUI6 762 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 RCOR2Q8IZ40 523 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 MICALL1Q8N3F8 863 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 OTUD6BQ8N6M0 293 aa16.76■□□□□ 0.27
PHTF1-201ENST00000357783 RBM41Q96IZ5 413 aaKnown RBP16.76■□□□□ 0.27
PHTF1-201ENST00000357783 RPF1Q9H9Y2 349 aaKnown RBP16.76■□□□□ 0.27
PHTF1-201ENST00000357783 B4GALT4O60513 344 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 NFICP08651 508 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 CAV1Q03135 178 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 TTLL4Q14679 1199 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 RNF187Q5TA31 235 aaPredicted RBP16.75■□□□□ 0.27
PHTF1-201ENST00000357783 CCDC89Q8N998 374 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 STMN4Q9H169 189 aaPredicted RBP16.75■□□□□ 0.27
PHTF1-201ENST00000357783 TTC4O95801 387 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 SLC26A2P50443 739 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 CDH8P55286 799 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 HAUS1Q96CS2 278 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 ZNF518BQ9C0D4 1074 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 EFCC1Q9HA90 598 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 TJP2Q9UDY2 1190 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 DNPEPQ9ULA0 475 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 PCDHGC3Q9UN70 934 aa16.75■□□□□ 0.27
PHTF1-201ENST00000357783 ATXN2Q99700 1313 aaKnown RBP16.74■□□□□ 0.27
PHTF1-201ENST00000357783 GPR25O00155 361 aa16.74■□□□□ 0.27
PHTF1-201ENST00000357783 C22orf31O95567 290 aa16.74■□□□□ 0.27
PHTF1-201ENST00000357783 EIF4BP23588 611 aaKnown RBP16.74■□□□□ 0.27
PHTF1-201ENST00000357783 PPP1R15BQ5SWA1 713 aa16.74■□□□□ 0.27
PHTF1-201ENST00000357783 CPLX4Q7Z7G2 160 aa16.74■□□□□ 0.27
PHTF1-201ENST00000357783 ATXN2LQ8WWM7 1075 aaKnown RBP16.74■□□□□ 0.27
PHTF1-201ENST00000357783 CENPTQ96BT3 561 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms