RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 PHF2O75151 1096 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 IQCF3P0C7M6 154 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 SCP2P22307 547 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 FGFR4P22455 802 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 CTNNA2P26232 953 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 CHRNA3P32297 505 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 LIG4P49917 911 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 LBX1P52954 281 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 PPARDQ03181 441 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 ALCAMQ13740 583 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 E2F5Q15329 346 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 RNF180Q86T96 592 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 KLHDC9Q8NEP7 349 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 POMGNT1Q8WZA1 660 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 CDHR5Q9HBB8 845 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 INTS9Q9NV88 658 aaKnown RBP13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 SAMD15Q9P1V8 674 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 PARP2Q9UGN5 583 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 FRMPD3Q5JV73 1810 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 UBE4BO95155 1302 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 A0A1B0GUA9 196 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 RRN3P2A6NIE6 340 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 PODXLO00592 558 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 RGS16O15492 202 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 B4GALT5O43286 388 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 ATP2C2O75185 946 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 PRMT2P55345 433 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 IFI35P80217 286 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 SLC29A2Q14542 456 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 CNGA2Q16280 664 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 TMEM132AQ24JP5 1023 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 SEZ6Q53EL9 994 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 GDF6Q6KF10 455 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 ZBTB8OSQ8IWT0 167 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 LINC01465Q8N7H1 131 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 SLC17A8Q8NDX2 589 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 CTNNBL1Q8WYA6 563 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 ALG3Q92685 438 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 FAXDC2Q96IV6 333 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 DEFB118Q96PH6 123 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 MKNK1Q9BUB5 465 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 TRIM31Q9BZY9 425 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 NSRP1Q9H0G5 558 aaKnown RBP13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 STMN4Q9H169 189 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 IFT122Q9HBG6 1241 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 HSPBP1Q9NZL4 362 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 EXOC7Q9UPT5 735 aa13.47□□□□□ -0.25
RTFDC1-202ENST00000357348 ANKRD62A6NC57 917 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 MIF4GDA9UHW6 222 aaKnown RBP13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 SNX3O60493 162 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 TFDP1Q14186 410 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 CYP1B1Q16678 543 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 CCSAPQ6IQ19 270 aaPredicted RBP13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 C11orf63Q6NUN7 778 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 ZBTB33Q86T24 672 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 GLYCTKQ8IVS8 523 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 FAM186BQ8IYM0 893 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 ARHGEF26Q96DR7 871 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 SELENOSQ9BQE4 189 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 ROPN1BQ9BZX4 212 aaPredicted RBP13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 RNF208Q9H0X6 261 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 ROPN1Q9HAT0 212 aaPredicted RBP13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 SNX24Q9Y343 169 aa13.46□□□□□ -0.25
RTFDC1-202ENST00000357348 SIP14410 1827 aa13.46□□□□□ -0.26
RTFDC1-202ENST00000357348 CCDC189A1A4V9 331 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 PRKCBP05771 671 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 RARGP13631 454 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 PSMC2P35998 433 aaKnown RBP13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 ACLYP53396 1101 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 PLTPP55058 493 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 AUHQ13825 339 aaKnown RBP13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 SLMAPQ14BN4 828 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 PRELID2Q8N945 189 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 OSMRQ99650 979 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 ELAC2Q9BQ52 826 aaKnown RBP13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 TCHPQ9BT92 498 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 HAPLN2Q9GZV7 340 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 SEMA4AQ9H3S1 761 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 BATF3Q9NR55 127 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 AGAP1Q9UPQ3 857 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 FRMD4BQ9Y2L6 1034 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 RIPK2O43353 540 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 MSCO60682 206 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 KPNA6O60684 536 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 RARAP10276 462 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 RPL21P46778 160 aaKnown RBP13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 PDE6CP51160 858 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 GPC3P51654 580 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 NCALDP61601 193 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 ADAM17P78536 824 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 DRAP1Q14919 205 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 MAPK6Q16659 721 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 KCTD19Q17RG1 926 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 ACCSLQ4AC99 568 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 CBWD2Q8IUF1 395 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 RHOT2Q8IXI1 618 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 PCSK9Q8NBP7 692 aaKnown RBP13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 ART4Q93070 314 aa13.45□□□□□ -0.26
RTFDC1-202ENST00000357348 CPB2Q96IY4 423 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms