RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 USP17L10C9JJH3 530 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 TRIM24O15164 1050 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 OCM2P0CE71 109 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 OCMP0CE72 109 aaPredicted RBP13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 PHKA2P46019 1235 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 ELMO2Q96JJ3 720 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 CNPY3Q9BT09 278 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 CPVLQ9H3G5 476 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 TMEM161AQ9NX61 479 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 SOX13Q9UN79 622 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 SLC8A2Q9UPR5 921 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 SNX13Q9Y5W8 968 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 KDM6BO15054 1643 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZNF609O15014 1411 aa13.27□□□□□ -0.29
SYNCRIP-201ENST00000355238 FCGR1AP12314 374 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 FDPSP14324 419 aaKnown RBP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 OTUD4Q01804 1114 aaKnown RBP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 SLC10A5Q5PT55 438 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 TRIM65Q6PJ69 517 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 AENQ8WTP8 325 aaKnown RBP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 PAIP1Q9H074 479 aaKnown RBP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 COPG2Q9UBF2 871 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 GTF3C4Q9UKN8 822 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 PCDHB2Q9Y5E7 798 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZNF197O14709 1029 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 FKBP9O95302 570 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 STILQ15468 1287 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 EAPPQ56P03 285 aaPredicted RBP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 FOXR1Q6PIV2 292 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 USP49Q70CQ1 688 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 FKBP9P1Q75LS8 142 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 NOP9Q86U38 636 aaKnown RBP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 ABI1Q8IZP0 508 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 APBB2Q92870 758 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 CDC42EP4Q9H3Q1 356 aaKnown RBP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 SP110Q9HB58 689 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 EIF3DO15371 548 aaKnown RBP eCLIP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 CCNA1P78396 465 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 TSPY1Q01534 308 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 TBL3Q12788 808 aaKnown RBP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 GRM1Q13255 1194 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 CENPPQ6IPU0 288 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 SPATA18Q8TC71 538 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 C17orf80Q9BSJ5 609 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 A0A0A6YYK5 440 aaPredicted RBP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 AP5Z1O43299 807 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 PSTPIP1O43586 416 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 BLVRAP53004 296 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 SNAP25P60880 206 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 MIGA2Q7L4E1 593 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 CALML6Q8TD86 181 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 MTERF3Q96E29 417 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 MAGED4Q96JG8 741 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 MCEEQ96PE7 176 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 ASAP1Q9ULH1 1129 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 TRAPPC3O43617 180 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 TLR2O60603 784 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 NBNO60934 754 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 AP1G2O75843 785 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 PLEKP08567 350 aaPredicted RBP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 RFC5P40937 340 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 C21orf59P57076 290 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 DMPKQ09013 629 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 TP53BP2Q13625 1128 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 KCTD17Q8N5Z5 321 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 RSPH1Q8WYR4 309 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZNF184Q99676 751 aaPredicted RBP13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 SAR1AQ9NR31 198 aa13.26□□□□□ -0.29
SYNCRIP-201ENST00000355238 FAM205CA6NFA0 338 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 TOMM70O94826 608 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 CTDNEP1O95476 244 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 ATP5BP06576 529 aaKnown RBP13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 GLI1P08151 1106 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 RALAP11233 206 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 ATP1A4Q13733 1029 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 SPDYCQ5MJ68 293 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 RC3H1Q5TC82 1133 aaKnown RBP13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 MROH9Q5TGP6 573 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 WDR60Q8WVS4 1066 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 GOLPH3Q9H4A6 298 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 NPHP3-ACAD11A0A0J9YXS1 232 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZBTB39O15060 712 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 SNRPFP62306 86 aaKnown RBP13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 EZH2Q15910 746 aaKnown RBP13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 ADGRF4Q8IZF3 695 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 FLCNQ8NFG4 579 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 RAD21L1Q9H4I0 556 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 C2CD2Q9Y426 696 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 DYTNA2CJ06 578 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 CES2O00748 559 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 HSD17B4P51659 736 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 LAYNQ6UX15 382 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZBTB49Q6ZSB9 765 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 SULF1Q8IWU6 871 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 POLR3FQ9H1D9 316 aaPredicted RBP13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZNF23P17027 643 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 PEX5P50542 639 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 ALDH5A1P51649 535 aaPredicted RBP13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 CLEC4GQ6UXB4 293 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 B3GNT6Q6ZMB0 384 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms