RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 NLRP14Q86W24 1093 aa12.33□□□□□ -0.44
TRAF3-201ENST00000347662 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-201ENST00000347662 SEPT5Q99719 369 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-201ENST00000347662 TBC1D22BQ9NU19 505 aa12.33□□□□□ -0.44
TRAF3-201ENST00000347662 SH3GLB1Q9Y371 365 aa12.33□□□□□ -0.44
TRAF3-201ENST00000347662 TRPM1Q7Z4N2 1603 aa12.33□□□□□ -0.44
TRAF3-201ENST00000347662 PRIM2P49643 509 aa12.33□□□□□ -0.44
TRAF3-201ENST00000347662 PFKFB3Q16875 520 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-201ENST00000347662 APLFQ8IW19 511 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-201ENST00000347662 OR8H2Q8N162 312 aa12.33□□□□□ -0.44
TRAF3-201ENST00000347662 FLT1P17948 1338 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 CHUKO15111 745 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 SDC4P31431 198 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 SOX6P35712 828 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 ARFIP2P53365 341 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 IQCF2Q8IXL9 164 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 USP33Q8TEY7 942 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 FOXP3Q9BZS1 431 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 ANAPC2Q9UJX6 822 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 NUDT14O95848 222 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 TNNI3P19429 210 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 EIF4A3P38919 411 aaKnown RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 QARSP47897 775 aaKnown RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 SRLQ86TD4 932 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 SLC30A1Q9Y6M5 507 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 RAD23BP54727 409 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 HIST2H2ACQ16777 129 aaPredicted RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 HIST2H2AA3Q6FI13 130 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 MICU2Q8IYU8 434 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 C19orf18Q8NEA5 215 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 MDM1Q8TC05 714 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 TGS1Q96RS0 853 aaKnown RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 S100A13Q99584 98 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 MRPL1Q9BYD6 325 aaKnown RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 LY9Q9HBG7 655 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 RPAP1Q9BWH6 1393 aaPredicted RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 KDSRQ06136 332 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 TRIM28Q13263 835 aaKnown RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 OXER1Q8TDS5 423 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 A8MXQ7 604 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 AKAP5P24588 427 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 TPI1P60174 286 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 ZNF34Q8IZ26 560 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 WDR36Q8NI36 951 aaKnown RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 ZKSCAN4Q969J2 545 aaPredicted RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 PARK7Q99497 189 aaKnown RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 TEX13BQ9BXU2 312 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 TBC1D23Q9NUY8 699 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 ERAP1Q9NZ08 941 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 STOML1Q9UBI4 398 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 USP42Q9H9J4 1324 aaKnown RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 PTPN1P18031 435 aaKnown RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 SULT1E1P49888 294 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 SCARA3Q6AZY7 606 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 FAM45BPQ6NSW5 357 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 TAF8Q7Z7C8 310 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 PALB2Q86YC2 1186 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 TTC13Q8NBP0 860 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 CLMNQ96JQ2 1002 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 TUFT1Q9NNX1 390 aa12.32□□□□□ -0.44
TRAF3-201ENST00000347662 CNOT8Q9UFF9 292 aaKnown RBP12.32□□□□□ -0.44
TRAF3-201ENST00000347662 ACADMP11310 421 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 CATSPER1Q8NEC5 780 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 SLC16A10Q8TF71 515 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 MRPL48Q96GC5 212 aaKnown RBP12.31□□□□□ -0.44
TRAF3-201ENST00000347662 MTFR1LQ9H019 292 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 CDC23Q9UJX2 597 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 ABCA6Q8N139 1617 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 EVPLLA8MZ36 301 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 FAM25AB3EWG3 89 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 FAM25CB3EWG5 89 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 FAM25GB3EWG6 89 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 HSD17B4P51659 736 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 PLIN5Q00G26 463 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 ZRANB3Q5FWF4 1079 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 MMGT1Q8N4V1 131 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 SPATA18Q8TC71 538 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 DDI1Q8WTU0 396 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 STAMBPL1Q96FJ0 436 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 GPR63Q9BZJ6 419 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 BLOC1S6Q9UL45 172 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 ASB14A6NK59 587 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 PODXLO00592 558 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 AP3D1O14617 1153 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 NDUFB10O96000 172 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 TFRCP02786 760 aaKnown RBP12.31□□□□□ -0.44
TRAF3-201ENST00000347662 CSTF3Q12996 717 aaKnown RBP12.31□□□□□ -0.44
TRAF3-201ENST00000347662 HIC1Q14526 733 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 FUT11Q495W5 492 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 GPT2Q8TD30 523 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 LXNQ9BS40 222 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 CYP39A1Q9NYL5 469 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 ZFATQ9P243 1243 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 APOL1O14791 398 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 TDP2O95551 362 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 PDIA2Q13087 525 aaKnown RBP12.31□□□□□ -0.44
TRAF3-201ENST00000347662 TFDP2Q14188 446 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 LRRC49Q8IUZ0 686 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms