RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MARCOQ9UEW3 520 aaPredicted RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 CPSF3Q9UKF6 684 aaKnown RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 L1RE1Q9UN81 338 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 ATP10DQ9P241 1426 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 TCN1P20061 433 aaPredicted RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 SP100P23497 879 aaPredicted RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 BST2Q10589 180 aaKnown RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 NEDD8Q15843 81 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 ANKRD13DQ6ZTN6 518 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 ANKRD13CQ8N6S4 541 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 XPO6Q96QU8 1125 aaKnown RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 WDR24Q96S15 920 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 KATNAL1Q9BW62 490 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 GSDMCQ9BYG8 508 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 HDAC6Q9UBN7 1215 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 GPN3Q9UHW5 284 aaPredicted RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 ABCA9Q8IUA7 1624 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 B4E1Z4 1266 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 FARP2O94887 1054 aaPredicted RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 TYK2P29597 1187 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 GDI2P50395 445 aaKnown RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 SP4Q02446 784 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 ZNF846Q147U1 533 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 P3H1Q32P28 736 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 FAM102BQ5T8I3 360 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 CYFIP1Q7L576 1253 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 UXS1Q8NBZ7 420 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 TSPAN14Q8NG11 270 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 PCDH12Q9NPG4 1184 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 CRNNQ9UBG3 495 aaPredicted RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 GPC6Q9Y625 555 aaPredicted RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 V9GYQ6 96 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 CHD1O14646 1710 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 B2RBV5 119 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 JAK2O60674 1132 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 GCLCP48506 637 aaPredicted RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 MCCD1P59942 119 aaPredicted RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 EFL1Q7Z2Z2 1120 aaKnown RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 HSPH1Q92598 858 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 NUAK2Q9H093 628 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 EPB41L4AQ9HCS5 686 aaPredicted RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 VPS54Q9P1Q0 977 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SERTAD1Q9UHV2 236 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ESYT3A0FGR9 886 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ARHGDIBP52566 201 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ADAM17P78536 824 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 LRRC74AQ0VAA2 488 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ZNF827Q17R98 1081 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ITPRIPL1Q6GPH6 555 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 DNAJC7Q99615 494 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ROPN1BQ9BZX4 212 aaPredicted RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 CCSER1Q9C0I3 900 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ROPN1Q9HAT0 212 aaPredicted RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 PIH1D3Q9NQM4 214 aaKnown RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 SYNPO2Q9UMS6 1093 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ANKRD6Q9Y2G4 727 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SNX13Q9Y5W8 968 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SNX9Q9Y5X1 595 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 PSIP1O75475 530 aaKnown RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 LDHBP07195 334 aaKnown RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 CCNA2P20248 432 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 HK2P52789 917 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 PKP1Q13835 747 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SLC15A2Q16348 729 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 C5orf22Q49AR2 442 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 STK32CQ86UX6 486 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 OR6Y1Q8NGX8 325 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ZKSCAN4Q969J2 545 aaPredicted RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 C9orf16Q9BUW7 83 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 TRIM54Q9BYV2 358 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 TRPV5Q9NQA5 729 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 PKD2L1Q9P0L9 805 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 POLG2Q9UHN1 485 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 TPRKBQ9Y3C4 175 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 NCOR1O75376 2440 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 GPAA1O43292 621 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ATP5JP18859 108 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ITIH1P19827 911 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 POU5F1BQ06416 359 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 NCAPHQ15003 741 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SCARA3Q6AZY7 606 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 BNC2Q6ZN30 1099 aaPredicted RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 YTHDF3Q7Z739 585 aaKnown RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 SH2D3CQ8N5H7 860 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 TRPC4APQ8TEL6 797 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 VPS11Q9H270 941 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 V9GY48 417 aaPredicted RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 SMCHD1A6NHR9 2005 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 DUOX2Q9NRD8 1548 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 FAM170AA1A519 330 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 LGALS16A8MUM7 142 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 KPNA5O15131 536 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 TM9SF1O15321 606 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 FKBP9O95302 570 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 IFNA7P01567 189 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SPDYAQ5MJ70 313 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 PADI6Q6TGC4 694 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 FKBP9P1Q75LS8 142 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 NECAB2Q7Z6G3 386 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ADSSL1Q8N142 457 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms