RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CCINQ13939 588 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 HSP90AA2PQ14568 343 aaPredicted RBP6.93□□□□□ -1.3
SMG1-201ENST00000330588 PTPAQ15257 358 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 SF3A1Q15459 793 aaKnown RBP6.93□□□□□ -1.3
SMG1-201ENST00000330588 NAB2Q15742 525 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 USP41Q3LFD5 358 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 TMEM31Q5JXX7 168 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 NT5DC1Q5TFE4 455 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 ATL3Q6DD88 541 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 CES5AQ6NT32 575 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 PSAPL1Q6NUJ1 521 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 FUT10Q6P4F1 479 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 MPZL3Q6UWV2 235 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 ALKAL1Q6UXT8 129 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 EP400NLQ6ZTU2 488 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 KCNK18Q7Z418 384 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 BMP8AQ7Z5Y6 402 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 RBM23Q86U06 439 aaKnown RBP6.93□□□□□ -1.3
SMG1-201ENST00000330588 FMR1NBQ8N0W7 255 aaPredicted RBP6.93□□□□□ -1.3
SMG1-201ENST00000330588 TMEM161BQ8NDZ6 487 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 PIK3R5Q8WYR1 880 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 HVCN1Q96D96 273 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 KLHL5Q96PQ7 755 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 PPP1R10Q96QC0 940 aaKnown RBP6.93□□□□□ -1.3
SMG1-201ENST00000330588 RUSC1Q9BVN2 902 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 CCDC94Q9BW85 323 aaPredicted RBP6.93□□□□□ -1.3
SMG1-201ENST00000330588 PLEKHA4Q9H4M7 779 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 PLEKHA5Q9HAU0 1116 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 CD320Q9NPF0 282 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 MIOSQ9NXC5 875 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 CNTN3Q9P232 1028 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 PARP2Q9UGN5 583 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 HES2Q9Y543 173 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 PCDHGC5Q9Y5F6 944 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 SRPRBQ9Y5M8 271 aaKnown RBP6.93□□□□□ -1.3
SMG1-201ENST00000330588 MYH15Q9Y2K3 1946 aa6.93□□□□□ -1.3
SMG1-201ENST00000330588 CHD7Q9P2D1 2997 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 MYH11P35749 1972 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 COL6A3P12111 3177 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 A0A087WWV3 80 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 CCDC169A6NNP5 214 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 NT5C1B-RDH14C9J2C7 533 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 PER2O15055 1255 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 MAP3K6O95382 1288 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 ADRB2P07550 413 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 CNPP09543 421 aaKnown RBP6.92□□□□□ -1.3
SMG1-201ENST00000330588 KCNE1P15382 129 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 RPL9P32969 192 aaKnown RBP6.92□□□□□ -1.3
SMG1-201ENST00000330588 OR1G1P47890 313 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 NASPP49321 788 aaPredicted RBP6.92□□□□□ -1.3
SMG1-201ENST00000330588 PEX3P56589 373 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 RBM10P98175 930 aaKnown RBP6.92□□□□□ -1.3
SMG1-201ENST00000330588 MCL1Q07820 350 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 SHISA2Q6UWI4 295 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.92□□□□□ -1.3
SMG1-201ENST00000330588 MAEAQ7L5Y9 396 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 ZDHHC14Q8IZN3 488 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 TMEM87AQ8NBN3 555 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 NUDT8Q8WV74 236 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 LARP4BQ92615 738 aaKnown RBP6.92□□□□□ -1.3
SMG1-201ENST00000330588 RAD54LQ92698 747 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 FBXL18Q96ME1 805 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 GBP3Q9H0R5 595 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 CDT1Q9H211 546 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 ZFP64Q9NPA5 681 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 BLOC1S4Q9NUP1 217 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 ZDHHC7Q9NXF8 308 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 CCDC39Q9UFE4 941 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 MAFFQ9ULX9 164 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 PDCD11Q14690 1871 aaKnown RBP6.92□□□□□ -1.3
SMG1-201ENST00000330588 TRANK1O15050 2925 aa6.92□□□□□ -1.3
SMG1-201ENST00000330588 VPS37CA5D8V6 355 aaPredicted RBP6.91□□□□□ -1.3
SMG1-201ENST00000330588 TRAPPC3O43617 180 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 STX6O43752 255 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 PPP6R2O75170 966 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 YEATS4O95619 227 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 GLUD1P00367 558 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 EDN1P05305 212 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 CYP3A5P20815 502 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 AKAP5P24588 427 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 MPSTP25325 297 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 KLRC2P26717 231 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 CDC25AP30304 524 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 DDIT3P35638 169 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 ALCAMQ13740 583 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 NOLC1Q14978 699 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMG1-201ENST00000330588 SLC39A14Q15043 492 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 ZNF568Q3ZCX4 644 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 ARSHQ5FYA8 562 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 ATAT1Q5SQI0 421 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 EEF1DP3Q658K8 133 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 DCLRE1AQ6PJP8 1040 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 GPR149Q86SP6 731 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 CD302Q8IX05 232 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 SNX27Q96L92 541 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 CUEDC2Q9H467 287 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 PARVGQ9HBI0 331 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 C11orf16Q9NQ32 467 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 SNTG2Q9NY99 539 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 KLK14Q9P0G3 267 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms