RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 PARD3BQ8TEW8 1205 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 DIS3LQ8TF46 1054 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TRIM43Q96BQ3 446 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 FAM49AQ9H0Q0 323 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 BLZF1Q9H2G9 400 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TMX1Q9H3N1 280 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ABCB6Q9NP58 842 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 SLC39A2Q9NP94 309 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 INTS13Q9NVM9 706 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ATXN7L1Q9ULK2 861 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 CTNND2Q9UQB3 1225 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 BZW2Q9Y6E2 419 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 OR6C75A6NL08 312 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 C1QTNF9BB2RNN3 333 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 M0QZQ0 153 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 THP07101 528 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TPM1P09493 284 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 SETSIPP0DME0 302 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 SCNN1AP37088 669 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 MAP2K3P46734 347 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 MBTPS1Q14703 1052 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 NCAPHQ15003 741 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 EPC2Q52LR7 807 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ACBD5Q5T8D3 534 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 GBP6Q6ZN66 633 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 SYT9Q86SS6 491 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ABI1Q8IZP0 508 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 APPL2Q8NEU8 664 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TRAPPC12Q8WVT3 735 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF592Q92610 1267 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 CNOT6LQ96LI5 555 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TRIM62Q9BVG3 475 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 NAA15Q9BXJ9 866 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 PNPLA8Q9NP80 782 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 GPRC5CQ9NQ84 441 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 PCDHGC4Q9Y5F7 938 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 BACE2Q9Y5Z0 518 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 PLXNA4Q9HCM2 1894 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 HELZP42694 1942 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM229AB2RXF0 380 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 KCNJ18B7U540 433 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 PIRO00625 290 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 OFD1O75665 1012 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 PRPF6O94906 941 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 GJB5O95377 273 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 NPTXRO95502 500 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 C4BPAP04003 597 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ERBB2P04626 1255 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 PAEPP09466 180 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 BMP6P22004 513 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 WARSP23381 471 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ADSSP30520 456 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 CD52P31358 61 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 LHX1P48742 406 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 MRE11P49959 708 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 GSCP56915 257 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 GSDMDP57764 484 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ERVK-21P61565 698 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 INCA1Q0VD86 236 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 SFSWAPQ12872 951 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 KCNJ12Q14500 433 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 GPNMBQ14956 572 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM132AQ24JP5 1023 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 DPCR1Q3MIW9 517 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 CCDC40Q4G0X9 1142 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ANO6Q4KMQ2 910 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ANKRD40Q6AI12 368 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 CRELD2Q6UXH1 353 aaPredicted RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TRIM72Q6ZMU5 477 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 DDX53Q86TM3 631 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 DHX40Q8IX18 779 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ZNF276Q8N554 614 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 GOLGA6L1Q8N7Z2 621 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 LEMD2Q8NC56 503 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 FBXL13Q8NEE6 735 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 PPP2R3CQ969Q6 453 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 SUSD3Q96L08 255 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 ADAM2Q99965 735 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TARS2Q9BW92 718 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 BCO2Q9BYV7 579 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 RNF19AQ9NV58 838 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 GDAQ9Y2T3 454 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 R3HCC1Q9Y3T6 440 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 TELO2Q9Y4R8 837 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 SLC4A7Q9Y6M7 1214 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 NCANO14594 1321 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 CLUHO75153 1309 aa3.54□□□□□ -1.84
SCAMP1-201ENST00000320280 NPHP3-ACAD11A0A0J9YXS1 232 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ZBTB39O15060 712 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 NRDCO43847 1150 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 RECQL4O94761 1208 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 TMEM191BP0C7N4 346 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 SRGAP2BP0DMP2 458 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 GHRP10912 638 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 ODC1P11926 461 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 WEE1P30291 646 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 HOXA9P31269 272 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 HNRNPH3P31942 346 aaKnown RBP3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 FMO5P49326 533 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms