RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 CLEC16AQ2KHT3 1053 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 GLRA4Q5JXX5 417 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CLLU1OSQ5K130 101 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ACAD10Q6JQN1 1059 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ZNF606Q8WXB4 792 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 BADQ92934 168 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ZNF560Q96MR9 790 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SDCBP2Q9H190 292 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TAS2R14Q9NYV8 317 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 KIAA1257Q9ULG3 409 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TTC3P53804 2025 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 NCANO14594 1321 aa13.68□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CTAGE9A4FU28 777 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 THP07101 528 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PAX3P23760 479 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 RPL9P32969 192 aaKnown RBP13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 EPHB4P54760 987 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 HADHBP55084 474 aaKnown RBP13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TNNC1P63316 161 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 MLLT1Q03111 559 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SOX4Q06945 474 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 IKBKEQ14164 716 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TAF3Q5VWG9 929 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 RNF169Q8NCN4 708 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 WHAMMQ8TF30 809 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 UBE2Q2Q8WVN8 375 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 NAPGQ99747 312 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ZNF518BQ9C0D4 1074 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PRKAG2Q9UGJ0 569 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 BARX2Q9UMQ3 279 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PCDHGC3Q9UN70 934 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PCDHGC5Q9Y5F6 944 aa13.67□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 MACROD2A1Z1Q3 448 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ACRP10323 421 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 FGFR1P11362 822 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CD58P19256 250 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 RAD23BP54727 409 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CDH8P55286 799 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 GPC5P78333 572 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CENPCQ03188 943 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 DPH6Q7L8W6 267 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CTNNBL1Q8WYA6 563 aaPredicted RBP13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 RFFLQ8WZ73 363 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 VCPIP1Q96JH7 1222 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ALS2CR12Q96Q35 445 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SMYD3Q9H7B4 428 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SEPT11Q9NVA2 429 aaKnown RBP13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 JRKLQ9Y4A0 524 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 COL4A6Q14031 1691 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PPEF2O14830 753 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 MTA2O94776 668 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CLSTN1O94985 981 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 LSM8O95777 96 aaKnown RBP13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CDH5P33151 784 aaPredicted RBP13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TAF6P49848 677 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SCNN1GP51170 649 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 FPGSQ05932 587 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PPIGQ13427 754 aaKnown RBP eCLIP13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SV2CQ496J9 727 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PAPD7Q5XG87 772 aaKnown RBP13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SCARA5Q6ZMJ2 495 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 UNC93AQ86WB7 457 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 NPAS4Q8IUM7 802 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 RHOT2Q8IXI1 618 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SLC4A11Q8NBS3 891 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TMEM176AQ96HP8 235 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 LHX5Q9H2C1 402 aa13.66□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SCN1AP35498 2009 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 KPNA7A9QM74 516 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 THAP12O43422 761 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 MED7O43513 233 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 EFCAB14O75071 495 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 BAIAP3O94812 1187 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 MOCS3O95396 460 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CYP1A2P05177 515 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 MYBL1P10243 752 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 VDRP11473 427 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PRLRP16471 622 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SYN1P17600 705 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 LILRA4P59901 499 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 WDR5P61964 334 aaKnown RBP13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 GLB1LQ6UWU2 654 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SLFN11Q7Z7L1 901 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PHF13Q86YI8 300 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CYFIP2Q96F07 1278 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 TRIM11Q96F44 468 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ZSWIM1Q9BR11 485 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ELOVL4Q9GZR5 314 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 GTF3C4Q9UKN8 822 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 ZMYND8Q9ULU4 1186 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 PCDHB7Q9Y5E2 793 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 SNX9Q9Y5X1 595 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 CAPN6Q9Y6Q1 641 aa13.65□□□□□ -0.22
SHANK2-AS3-201ENST00000307548 RANBP2P49792 3224 aaKnown RBP13.64□□□□□ -0.23
SHANK2-AS3-201ENST00000307548 TMCO5BA8MYB1 307 aa13.64□□□□□ -0.23
SHANK2-AS3-201ENST00000307548 IBSPP21815 317 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms