RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
USP38-201ENST00000307017 PACSIN3Q9UKS6 424 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 EME2A4GXA9 379 aaPredicted RBP13.19□□□□□ -0.3
USP38-201ENST00000307017 TCF3P15923 654 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 CHRNA5P30532 468 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 SERPINB1P30740 379 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 HSD17B3P37058 310 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 QARSP47897 775 aaKnown RBP13.19□□□□□ -0.3
USP38-201ENST00000307017 URGCPQ8TCY9 931 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 RFFLQ8WZ73 363 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 SRPK1Q96SB4 655 aaKnown RBP13.19□□□□□ -0.3
USP38-201ENST00000307017 SPATA2Q9UM82 520 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 GRID2IPA4D2P6 1211 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 MYMKA6NI61 221 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 LRRIQ3A6PVS8 624 aaPredicted RBP13.19□□□□□ -0.3
USP38-201ENST00000307017 KATNA1O75449 491 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 MMP10P09238 476 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 IL6STP40189 918 aaPredicted RBP13.19□□□□□ -0.3
USP38-201ENST00000307017 SERPINB10P48595 397 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 TRIM16LQ309B1 348 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 HAUS6Q7Z4H7 955 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 CDKL3Q8IVW4 592 aaPredicted RBP13.19□□□□□ -0.3
USP38-201ENST00000307017 NDUFAF2Q8N183 169 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 CATSPER2Q96P56 530 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 PRR12Q9ULL5 1215 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 SNX8Q9Y5X2 465 aa13.19□□□□□ -0.3
USP38-201ENST00000307017 RASSF9O75901 435 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 USP1O94782 785 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 LDHAP00338 332 aaKnown RBP13.18□□□□□ -0.3
USP38-201ENST00000307017 ASNSP08243 561 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 PCNAP12004 261 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 SOX10P56693 466 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 TFDP2Q14188 446 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 MGAT5BQ3V5L5 792 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 UBASH3BQ8TF42 649 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 NACC2Q96BF6 587 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 ZFP42Q96MM3 310 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 SEPHS2Q99611 448 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 BARHL2Q9NY43 387 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 BFARQ9NZS9 450 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 PHTF1Q9UMS5 762 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 PLXNC1O60486 1568 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 GOLGA8TH3BQL2 631 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 SGPL1O95470 568 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 ZNF682O95780 498 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 KCNMA1Q12791 1236 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 TTC39BQ5VTQ0 682 aaPredicted RBP13.18□□□□□ -0.3
USP38-201ENST00000307017 CES3Q6UWW8 571 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 NANOGNBQ7Z5D8 188 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 PLEKHA8Q96JA3 519 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 DCP1AQ9NPI6 582 aaPredicted RBP13.18□□□□□ -0.3
USP38-201ENST00000307017 DYRK4Q9NR20 520 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 PAIP2BQ9ULR5 123 aaKnown RBP13.18□□□□□ -0.3
USP38-201ENST00000307017 GSTM1P09488 218 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 SP100P23497 879 aaPredicted RBP13.18□□□□□ -0.3
USP38-201ENST00000307017 HMGCS2P54868 508 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 ZSWIM7Q19AV6 140 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 CCNI2Q6ZMN8 369 aaPredicted RBP13.18□□□□□ -0.3
USP38-201ENST00000307017 BLOC1S5Q8TDH9 187 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 ARHGEF3Q9NR81 526 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 SELENONQ9NZV5 590 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
USP38-201ENST00000307017 NT5DC3Q86UY8 548 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 PSMC3IPQ9P2W1 217 aaPredicted RBP13.18□□□□□ -0.3
USP38-201ENST00000307017 SOX13Q9UN79 622 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 TEX14Q8IWB6 1497 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 LTFP02788 710 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 PGK2P07205 417 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 BAG6P46379 1132 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 PTRHD1Q6GMV3 140 aaKnown RBP13.18□□□□□ -0.3
USP38-201ENST00000307017 JAMLQ86YT9 394 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 TTC13Q8NBP0 860 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 TRIM8Q9BZR9 551 aa13.18□□□□□ -0.3
USP38-201ENST00000307017 ARHGEF37A1IGU5 675 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 ASAP2O43150 1006 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 KRT7P08729 469 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 CHI3L1P36222 383 aaPredicted RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 JAK3P52333 1124 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 DGKKQ5KSL6 1271 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 MTDHQ86UE4 582 aaKnown RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 MB21D2Q8IYB1 491 aaPredicted RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 ATL2Q8NHH9 583 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 OMA1Q96E52 524 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 PSMD11O00231 422 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 PRKCBP05771 671 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 GNAT1P11488 350 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 ARF5P84085 180 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 STK4Q13043 487 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 OR6J1Q8NGC5 347 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 EMID1Q96A84 441 aaPredicted RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 SIKE1Q9BRV8 207 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 NOL6Q9H6R4 1146 aaKnown RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 CHST12Q9NRB3 414 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP38-201ENST00000307017 DDX56Q9NY93 547 aaKnown RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 MRPL39Q9NYK5 338 aaKnown RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 FAM153AQ9UHL3 310 aa13.17□□□□□ -0.3
USP38-201ENST00000307017 MIF4GDA9UHW6 222 aaKnown RBP13.17□□□□□ -0.3
USP38-201ENST00000307017 F5H6K3 240 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms