RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SMIM28A0A1B0GU29 152 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 SPOPO43791 374 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 FGGP02679 453 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 CHRNA1P02708 482 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 ITGA4P13612 1032 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 MCM3P25205 808 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 CST5P28325 142 aaPredicted RBP23.69■■□□□ 1.38
SMAD1-201ENST00000302085 TNNC1P63316 161 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 MYO1EQ12965 1108 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 C8orf74Q6P047 294 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 RSPH3Q86UC2 560 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 IPPQ9Y573 584 aa23.69■■□□□ 1.38
SMAD1-201ENST00000302085 M0QZ92 97 aa23.68■■□□□ 1.38
SMAD1-201ENST00000302085 KRIT1O00522 736 aa23.68■■□□□ 1.38
SMAD1-201ENST00000302085 MED7O43513 233 aa23.68■■□□□ 1.38
SMAD1-201ENST00000302085 HOXD10P28358 340 aa23.68■■□□□ 1.38
SMAD1-201ENST00000302085 CTNNA1P35221 906 aaKnown RBP23.68■■□□□ 1.38
SMAD1-201ENST00000302085 PTPN11Q06124 597 aaPredicted RBP23.68■■□□□ 1.38
SMAD1-201ENST00000302085 INCA1Q0VD86 236 aa23.68■■□□□ 1.38
SMAD1-201ENST00000302085 MAP3K21Q5TCX8 1036 aa23.68■■□□□ 1.38
SMAD1-201ENST00000302085 AADACL2Q6P093 401 aa23.68■■□□□ 1.38
SMAD1-201ENST00000302085 SESTD1Q86VW0 696 aa23.68■■□□□ 1.38
SMAD1-201ENST00000302085 KLHL7Q8IXQ5 586 aa23.68■■□□□ 1.38
SMAD1-201ENST00000302085 FUT8Q9BYC5 575 aa23.68■■□□□ 1.38
SMAD1-201ENST00000302085 LHX5Q9H2C1 402 aa23.68■■□□□ 1.38
SMAD1-201ENST00000302085 MYO1FO00160 1098 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 ARRDC4Q8NCT1 418 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 SENP6Q9GZR1 1112 aaPredicted RBP23.67■■□□□ 1.38
SMAD1-201ENST00000302085 MRPL47Q9HD33 250 aaKnown RBP23.67■■□□□ 1.38
SMAD1-201ENST00000302085 FAM53CQ9NYF3 392 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 BARX2Q9UMQ3 279 aaPredicted RBP23.67■■□□□ 1.38
SMAD1-201ENST00000302085 TCRBV5S1A1TA0A578 114 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 CCDC66A2RUB6 948 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 ATP8B1O43520 1251 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 SASH3O75995 380 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 GJB6O95452 261 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 CALB1P05937 261 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 KCNE1P15382 129 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 NDST1P52848 882 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 C9orf57Q5W0N0 161 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 RPAINQ86UA6 219 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 PARVAQ9NVD7 372 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 STIM2Q9P246 746 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 CYTH4Q9UIA0 394 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 UBQLN1Q9UMX0 589 aaKnown RBP23.67■■□□□ 1.38
SMAD1-201ENST00000302085 L1RE1Q9UN81 338 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 ST3GAL5Q9UNP4 418 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 NR2E1Q9Y466 385 aa23.67■■□□□ 1.38
SMAD1-201ENST00000302085 SCN1AP35498 2009 aa23.66■■□□□ 1.38
SMAD1-201ENST00000302085 HMGCRP04035 888 aa23.66■■□□□ 1.38
SMAD1-201ENST00000302085 CTSHP09668 335 aa23.66■■□□□ 1.38
SMAD1-201ENST00000302085 APLP1P51693 650 aa23.66■■□□□ 1.38
SMAD1-201ENST00000302085 MGAT3Q09327 533 aa23.66■■□□□ 1.38
SMAD1-201ENST00000302085 TWF2Q6IBS0 349 aaKnown RBP23.66■■□□□ 1.38
SMAD1-201ENST00000302085 ERICH1Q86X53 443 aa23.66■■□□□ 1.38
SMAD1-201ENST00000302085 LRRC52Q8N7C0 313 aa23.66■■□□□ 1.38
SMAD1-201ENST00000302085 FEZF2Q8TBJ5 459 aa23.66■■□□□ 1.38
SMAD1-201ENST00000302085 RUBCNQ92622 972 aa23.66■■□□□ 1.38
SMAD1-201ENST00000302085 HEXIM2Q96MH2 286 aaKnown RBP23.66■■□□□ 1.38
SMAD1-201ENST00000302085 FAM124BQ9H5Z6 455 aaPredicted RBP23.66■■□□□ 1.38
SMAD1-201ENST00000302085 SCINQ9Y6U3 715 aa23.66■■□□□ 1.38
SMAD1-201ENST00000302085 TLR3O15455 904 aaKnown RBP23.65■■□□□ 1.38
SMAD1-201ENST00000302085 PROSCO94903 275 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 GLI1P08151 1106 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 MYBL2P10244 700 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 PYGMP11217 842 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 TSPAN18Q96SJ8 248 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 DDX20Q9UHI6 824 aaKnown RBP23.65■■□□□ 1.38
SMAD1-201ENST00000302085 SPDYE4A6NLX3 237 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 CCDC188H7C350 402 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 PIRO00625 290 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 RPS6KA5O75582 802 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 VDRP11473 427 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 SLC1A1P43005 524 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 PCSK9Q8NBP7 692 aaKnown RBP23.65■■□□□ 1.38
SMAD1-201ENST00000302085 MRPL45Q9BRJ2 306 aaKnown RBP23.65■■□□□ 1.38
SMAD1-201ENST00000302085 CEP83Q9Y592 693 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 SNX9Q9Y5X1 595 aa23.65■■□□□ 1.38
SMAD1-201ENST00000302085 RAD51CO43502 376 aa23.64■■□□□ 1.38
SMAD1-201ENST00000302085 CNGA2Q16280 664 aa23.64■■□□□ 1.38
SMAD1-201ENST00000302085 PTGISQ16647 500 aa23.64■■□□□ 1.38
SMAD1-201ENST00000302085 TTC39CQ8N584 583 aa23.64■■□□□ 1.38
SMAD1-201ENST00000302085 OSBPL7Q9BZF2 842 aa23.64■■□□□ 1.38
SMAD1-201ENST00000302085 PLEKHA4Q9H4M7 779 aa23.64■■□□□ 1.38
SMAD1-201ENST00000302085 PDCD11Q14690 1871 aaKnown RBP23.64■■□□□ 1.37
SMAD1-201ENST00000302085 TMEM191CA6NGB0 347 aa23.63■■□□□ 1.37
SMAD1-201ENST00000302085 SART1O43290 800 aaKnown RBP23.63■■□□□ 1.37
SMAD1-201ENST00000302085 MICAL2O94851 1124 aa23.63■■□□□ 1.37
SMAD1-201ENST00000302085 CD4P01730 458 aa23.63■■□□□ 1.37
SMAD1-201ENST00000302085 RPL7AP62424 266 aaKnown RBP23.63■■□□□ 1.37
SMAD1-201ENST00000302085 SOX4Q06945 474 aaPredicted RBP23.63■■□□□ 1.37
SMAD1-201ENST00000302085 NFX1Q12986 1120 aaKnown RBP23.63■■□□□ 1.37
SMAD1-201ENST00000302085 DDX47Q9H0S4 455 aaKnown RBP23.63■■□□□ 1.37
SMAD1-201ENST00000302085 OGFRQ9NZT2 677 aa23.63■■□□□ 1.37
SMAD1-201ENST00000302085 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.63■■□□□ 1.37
SMAD1-201ENST00000302085 O00370 1275 aa23.63■■□□□ 1.37
SMAD1-201ENST00000302085 RWDD2BP57060 319 aa23.63■■□□□ 1.37
SMAD1-201ENST00000302085 PTPN20Q4JDL3 420 aa23.63■■□□□ 1.37
SMAD1-201ENST00000302085 CYP4A22Q5TCH4 519 aa23.63■■□□□ 1.37
SMAD1-201ENST00000302085 ADAT2Q7Z6V5 191 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms