RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 A8MXQ7 604 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 K7ENM7 598 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 ADRB2P07550 413 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 DLDP09622 509 aaKnown RBP11.47□□□□□ -0.57
ZNF558-201ENST00000301475 GPX6P59796 221 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 LSAMPQ13449 338 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 CLEC16AQ2KHT3 1053 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 EFHC2Q5JST6 749 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 TPTE2Q6XPS3 522 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 OTOP1Q7RTM1 612 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 ANKMY2Q8IV38 441 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 ARHGAP18Q8N392 663 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 MZB1Q8WU39 189 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 PANX3Q96QZ0 392 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 IWS1Q96ST2 819 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 TSSK1BQ9BXA7 367 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 FOXP3Q9BZS1 431 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 PHACTR1Q9C0D0 580 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 VCX3BQ9H321 246 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 VCX3AQ9NNX9 186 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 ATXN10Q9UBB4 475 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 SERPINB13Q9UIV8 391 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 DNPEPQ9ULA0 475 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 PPM1HQ9ULR3 514 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 STK24Q9Y6E0 443 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 SLC4A7Q9Y6M7 1214 aa11.47□□□□□ -0.57
ZNF558-201ENST00000301475 E5RJQ4 531 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 FCHO1O14526 889 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 CCNFP41002 786 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 GRIA2P42262 883 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 SCNN1BP51168 640 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 RAP1GDS1P52306 607 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 INHBCP55103 352 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 GAD2Q05329 585 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 PDIA2Q13087 525 aaKnown RBP11.46□□□□□ -0.57
ZNF558-201ENST00000301475 KRT72Q14CN4 511 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 CCDC62Q6P9F0 684 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 RIPOR1Q6ZS17 1223 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 ALYREFQ86V81 257 aaKnown RBP11.46□□□□□ -0.57
ZNF558-201ENST00000301475 TREML1Q86YW5 311 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 HELQQ8TDG4 1101 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 FAM163AQ96GL9 167 aaPredicted RBP11.46□□□□□ -0.57
ZNF558-201ENST00000301475 FNBP1Q96RU3 617 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 TUFT1Q9NNX1 390 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 SLC24A2Q9UI40 661 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 ANGPTL2Q9UKU9 493 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 H3BRJ5 948 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 ARL4CP56559 192 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 MARK2Q7KZI7 788 aaKnown RBP11.46□□□□□ -0.57
ZNF558-201ENST00000301475 SDCCAG8Q86SQ7 713 aaPredicted RBP11.46□□□□□ -0.57
ZNF558-201ENST00000301475 SHKBP1Q8TBC3 707 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 CYTH2Q99418 400 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 TUBB6Q9BUF5 446 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 NYXQ9GZU5 481 aa11.46□□□□□ -0.57
ZNF558-201ENST00000301475 SSU72Q9NP77 194 aaKnown RBP11.46□□□□□ -0.57
ZNF558-201ENST00000301475 CHCHD3Q9NX63 227 aaKnown RBP11.46□□□□□ -0.57
ZNF558-201ENST00000301475 GOLGA8IPA6NC78 632 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 A6NJR5 290 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 GOLGA8JA6NMD2 632 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 GOLGA8SH3BPF8 625 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 GOLGA8MH3BSY2 632 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 ALOX15BO15296 676 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 ARSEP51690 589 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 GPS1Q13098 491 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 RASA2Q15283 850 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 RAPH1Q70E73 1250 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.46□□□□□ -0.58
ZNF558-201ENST00000301475 MCOLN2Q8IZK6 566 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 BANPQ8N9N5 519 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 KLHL23Q8NBE8 558 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 RBM15BQ8NDT2 890 aaKnown RBP11.46□□□□□ -0.58
ZNF558-201ENST00000301475 OXNAD1Q96HP4 312 aaPredicted RBP11.46□□□□□ -0.58
ZNF558-201ENST00000301475 TTC1Q99614 292 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 EBF3Q9H4W6 596 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 ETNK2Q9NVF9 386 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 HSPBP1Q9NZL4 362 aa11.46□□□□□ -0.58
ZNF558-201ENST00000301475 LIASO43766 372 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 ONECUT3O60422 494 aaPredicted RBP11.45□□□□□ -0.58
ZNF558-201ENST00000301475 PSMD10O75832 226 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 CYP3A4P08684 503 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 MYL2P10916 166 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 UNGP13051 313 aaPredicted RBP11.45□□□□□ -0.58
ZNF558-201ENST00000301475 KRT10P13645 584 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 GLRA2P23416 452 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 CRABP2P29373 138 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 SSTR1P30872 391 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 ZNF76P36508 570 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 MFAP3P55082 362 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 TFDP1Q14186 410 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 MYBPC2Q14324 1141 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 TBC1D10BQ4KMP7 808 aaPredicted RBP11.45□□□□□ -0.58
ZNF558-201ENST00000301475 MDH1BQ5I0G3 518 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 MYLK4Q86YV6 388 aaPredicted RBP11.45□□□□□ -0.58
ZNF558-201ENST00000301475 CPA5Q8WXQ8 436 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 WDR83Q9BRX9 315 aaKnown RBP11.45□□□□□ -0.58
ZNF558-201ENST00000301475 CENPKQ9BS16 269 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 TOPORSQ9NS56 1045 aaPredicted RBP11.45□□□□□ -0.58
ZNF558-201ENST00000301475 RABGEF1Q9UJ41 708 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 COMMD3-BMI1R4GMX3 469 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 DENND3A2RUS2 1198 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms