RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 SH3GL2Q99962 352 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 PIAS1O75925 651 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 SRGAP2BP0DMP2 458 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 RPA1P27694 616 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 DEFB128Q7Z7B8 93 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 ATP11CQ8NB49 1132 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 BAP1Q92560 729 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 SLC5A5Q92911 643 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 SCINQ9Y6U3 715 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 CCDC22O60826 627 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 CBX6O95503 412 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 AP2B1P63010 937 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 SMTNL2Q2TAL5 461 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 ISLR2Q6UXK2 745 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 APTXQ7Z2E3 356 aaKnown RBP14.1□□□□□ -0.15
HPS3-201ENST00000296051 MSL3Q8N5Y2 521 aaKnown RBP14.1□□□□□ -0.15
HPS3-201ENST00000296051 ZNF560Q96MR9 790 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 FAM53CQ9NYF3 392 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 HEY2Q9UBP5 337 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 SEL1LQ9UBV2 794 aa14.1□□□□□ -0.15
HPS3-201ENST00000296051 PJA2O43164 708 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 MAP3K6O95382 1288 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 TCF7P36402 384 aaPredicted RBP14.09□□□□□ -0.15
HPS3-201ENST00000296051 SWT1Q5T5J6 900 aaKnown RBP14.09□□□□□ -0.15
HPS3-201ENST00000296051 NT5DC3Q86UY8 548 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 CYP2W1Q8TAV3 490 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 ATP6V1E2Q96A05 226 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 SYT17Q9BSW7 474 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 ROPN1BQ9BZX4 212 aaPredicted RBP14.09□□□□□ -0.15
HPS3-201ENST00000296051 ROPN1Q9HAT0 212 aaPredicted RBP14.09□□□□□ -0.15
HPS3-201ENST00000296051 BCAP29Q9UHQ4 241 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 HBP1O60381 514 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 PQBP1O60828 265 aaKnown RBP14.09□□□□□ -0.15
HPS3-201ENST00000296051 PTENP60484 403 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 ITIH4Q14624 930 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 NLRP9Q7RTR0 991 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 MTDHQ86UE4 582 aaKnown RBP14.09□□□□□ -0.15
HPS3-201ENST00000296051 AIPL1Q9NZN9 384 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.09□□□□□ -0.15
HPS3-201ENST00000296051 PDGFRBP09619 1106 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 PYGMP11217 842 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 GRIK1P39086 918 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 CASP5P51878 434 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 GIT2Q14161 759 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 PAN2Q504Q3 1202 aaKnown RBP14.09□□□□□ -0.15
HPS3-201ENST00000296051 MROH8Q9H579 483 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 AGPAT3Q9NRZ7 376 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 ZFATQ9P243 1243 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 SPATA31D1Q6ZQQ2 1576 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 NME3Q13232 169 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 ART3Q13508 389 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 TMEM259Q4ZIN3 620 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.09□□□□□ -0.15
HPS3-201ENST00000296051 ZNF512Q96ME7 567 aaPredicted RBP14.09□□□□□ -0.15
HPS3-201ENST00000296051 INPP4AQ96PE3 977 aaPredicted RBP14.09□□□□□ -0.15
HPS3-201ENST00000296051 MXRA8Q9BRK3 442 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 PCDHGC5Q9Y5F6 944 aa14.09□□□□□ -0.15
HPS3-201ENST00000296051 DNM1LO00429 736 aa14.08□□□□□ -0.15
HPS3-201ENST00000296051 ZBTB39O15060 712 aa14.08□□□□□ -0.15
HPS3-201ENST00000296051 ALDH7A1P49419 539 aaKnown RBP14.08□□□□□ -0.15
HPS3-201ENST00000296051 CDC42EP1Q00587 391 aa14.08□□□□□ -0.15
HPS3-201ENST00000296051 DEUP1Q05D60 604 aa14.08□□□□□ -0.15
HPS3-201ENST00000296051 BTBD8Q5XKL5 378 aa14.08□□□□□ -0.15
HPS3-201ENST00000296051 MTBPQ96DY7 904 aa14.08□□□□□ -0.15
HPS3-201ENST00000296051 PWWP2AQ96N64 755 aa14.08□□□□□ -0.15
HPS3-201ENST00000296051 TAS2R14Q9NYV8 317 aa14.08□□□□□ -0.15
HPS3-201ENST00000296051 NAALADL1Q9UQQ1 740 aa14.08□□□□□ -0.15
HPS3-201ENST00000296051 ZNF711Q9Y462 761 aa14.08□□□□□ -0.15
HPS3-201ENST00000296051 GOLGA8CPA6NN73 597 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 FOXO6A8MYZ6 492 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 SLC16A3O15427 465 aaKnown RBP14.08□□□□□ -0.16
HPS3-201ENST00000296051 EPHB2P29323 1055 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 MRPS35P82673 323 aaKnown RBP14.08□□□□□ -0.16
HPS3-201ENST00000296051 VGLL2Q8N8G2 317 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 DAGLBQ8NCG7 672 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 DHX38Q92620 1227 aaKnown RBP14.08□□□□□ -0.16
HPS3-201ENST00000296051 CBWD1Q9BRT8 395 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.08□□□□□ -0.16
HPS3-201ENST00000296051 DISP2A7MBM2 1401 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 PPP1R12AO14974 1030 aaPredicted RBP14.08□□□□□ -0.16
HPS3-201ENST00000296051 RIPK2O43353 540 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 CYTH1Q15438 398 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 KLHL38Q2WGJ6 581 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 ANKRD20A2Q5SQ80 823 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 ANKRD20A1Q5TYW2 823 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 ARID3BQ8IVW6 561 aaPredicted RBP14.08□□□□□ -0.16
HPS3-201ENST00000296051 GPD1LQ8N335 351 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 SERPINB12Q96P63 405 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 HSPA4LO95757 839 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 SDC4P31431 198 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 MARCKSL1P49006 195 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 EMC2Q15006 297 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 PDZD8Q8NEN9 1154 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 SEPT5Q99719 369 aaPredicted RBP14.08□□□□□ -0.16
HPS3-201ENST00000296051 STAP1Q9ULZ2 295 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 ANGPTL3Q9Y5C1 460 aa14.08□□□□□ -0.16
HPS3-201ENST00000296051 UBE4BO95155 1302 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 PMLP29590 882 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 CUL3Q13618 768 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 TRIP10Q15642 601 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms