RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 PI4K2AQ9BTU6 479 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 MKNK1Q9BUB5 465 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 SRRTQ9BXP5 876 aaKnown RBP7.01□□□□□ -1.29
CD44-204ENST00000279452 OXCT2Q9BYC2 517 aaPredicted RBP7.01□□□□□ -1.29
CD44-204ENST00000279452 ADAM7Q9H2U9 754 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 METTL14Q9HCE5 456 aaKnown RBP7.01□□□□□ -1.29
CD44-204ENST00000279452 ABI2Q9NYB9 513 aaPredicted RBP7.01□□□□□ -1.29
CD44-204ENST00000279452 MAGEC2Q9UBF1 373 aaPredicted RBP7.01□□□□□ -1.29
CD44-204ENST00000279452 RWDD2AQ9UIY3 292 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 FBXW11Q9UKB1 542 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 L1RE1Q9UN81 338 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 ATG2AQ2TAZ0 1938 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 CITO14578 2027 aa7□□□□□ -1.29
CD44-204ENST00000279452 CDH23Q9H251 3354 aa7□□□□□ -1.29
CD44-204ENST00000279452 A8MXQ7 604 aa7□□□□□ -1.29
CD44-204ENST00000279452 PES1O00541 588 aaKnown RBP7□□□□□ -1.29
CD44-204ENST00000279452 IKBKBO14920 756 aa7□□□□□ -1.29
CD44-204ENST00000279452 HCRTO43612 131 aa7□□□□□ -1.29
CD44-204ENST00000279452 ZMYND10O75800 440 aa7□□□□□ -1.29
CD44-204ENST00000279452 OAZ2O95190 189 aa7□□□□□ -1.29
CD44-204ENST00000279452 GNA14O95837 355 aa7□□□□□ -1.29
CD44-204ENST00000279452 C4BPAP04003 597 aaKnown RBP7□□□□□ -1.29
CD44-204ENST00000279452 CYP11A1P05108 521 aa7□□□□□ -1.29
CD44-204ENST00000279452 PDGFRBP09619 1106 aa7□□□□□ -1.29
CD44-204ENST00000279452 CCDC192P0DO97 292 aa7□□□□□ -1.29
CD44-204ENST00000279452 TRIM21P19474 475 aaKnown RBP7□□□□□ -1.29
CD44-204ENST00000279452 PTMSP20962 102 aa7□□□□□ -1.29
CD44-204ENST00000279452 PCSK1P29120 753 aa7□□□□□ -1.29
CD44-204ENST00000279452 ATICP31939 592 aa7□□□□□ -1.29
CD44-204ENST00000279452 GBP2P32456 591 aaPredicted RBP7□□□□□ -1.29
CD44-204ENST00000279452 MTHFRP42898 656 aa7□□□□□ -1.29
CD44-204ENST00000279452 LHX1P48742 406 aa7□□□□□ -1.29
CD44-204ENST00000279452 NOP14P78316 857 aaKnown RBP7□□□□□ -1.29
CD44-204ENST00000279452 CYP27A1Q02318 531 aa7□□□□□ -1.29
CD44-204ENST00000279452 PPP3CAQ08209 521 aa7□□□□□ -1.29
CD44-204ENST00000279452 TWF1Q12792 350 aa7□□□□□ -1.29
CD44-204ENST00000279452 MRPL58Q14197 206 aaKnown RBP7□□□□□ -1.29
CD44-204ENST00000279452 SMAD2Q15796 467 aaKnown RBP7□□□□□ -1.29
CD44-204ENST00000279452 TAF12Q16514 161 aa7□□□□□ -1.29
CD44-204ENST00000279452 STX1AQ16623 288 aa7□□□□□ -1.29
CD44-204ENST00000279452 SOWAHAQ2M3V2 549 aa7□□□□□ -1.29
CD44-204ENST00000279452 SGSM1Q2NKQ1 1148 aa7□□□□□ -1.29
CD44-204ENST00000279452 MGAT5BQ3V5L5 792 aa7□□□□□ -1.29
CD44-204ENST00000279452 HSP90AA4PQ58FG1 418 aa7□□□□□ -1.29
CD44-204ENST00000279452 WDR44Q5JSH3 913 aa7□□□□□ -1.29
CD44-204ENST00000279452 TPGS2Q68CL5 300 aa7□□□□□ -1.29
CD44-204ENST00000279452 KRT39Q6A163 491 aa7□□□□□ -1.29
CD44-204ENST00000279452 SPOPLQ6IQ16 392 aa7□□□□□ -1.29
CD44-204ENST00000279452 GET4Q7L5D6 327 aaPredicted RBP7□□□□□ -1.29
CD44-204ENST00000279452 DPH6Q7L8W6 267 aa7□□□□□ -1.29
CD44-204ENST00000279452 SPATA2LQ8IUW3 424 aaPredicted RBP7□□□□□ -1.29
CD44-204ENST00000279452 DCP1BQ8IZD4 617 aaKnown RBP7□□□□□ -1.29
CD44-204ENST00000279452 TMEM86AQ8N2M4 240 aa7□□□□□ -1.29
CD44-204ENST00000279452 ZNF461Q8TAF7 563 aa7□□□□□ -1.29
CD44-204ENST00000279452 TAS1R2Q8TE23 839 aa7□□□□□ -1.29
CD44-204ENST00000279452 TMEM174Q8WUU8 243 aa7□□□□□ -1.29
CD44-204ENST00000279452 CNOT6LQ96LI5 555 aaKnown RBP7□□□□□ -1.29
CD44-204ENST00000279452 NECTIN4Q96NY8 510 aa7□□□□□ -1.29
CD44-204ENST00000279452 DUSP9Q99956 384 aaKnown RBP7□□□□□ -1.29
CD44-204ENST00000279452 SYT15Q9BQS2 421 aa7□□□□□ -1.29
CD44-204ENST00000279452 MRPL45Q9BRJ2 306 aaKnown RBP7□□□□□ -1.29
CD44-204ENST00000279452 ZCWPW1Q9H0M4 648 aa7□□□□□ -1.29
CD44-204ENST00000279452 GZF1Q9H116 711 aaPredicted RBP7□□□□□ -1.29
CD44-204ENST00000279452 POMKQ9H5K3 350 aa7□□□□□ -1.29
CD44-204ENST00000279452 SMYD3Q9H7B4 428 aa7□□□□□ -1.29
CD44-204ENST00000279452 TMEM8AQ9HCN3 771 aa7□□□□□ -1.29
CD44-204ENST00000279452 ZDHHC7Q9NXF8 308 aa7□□□□□ -1.29
CD44-204ENST00000279452 GDAP2Q9NXN4 497 aa7□□□□□ -1.29
CD44-204ENST00000279452 AFF4Q9UHB7 1163 aaKnown RBP7□□□□□ -1.29
CD44-204ENST00000279452 SLC27A5Q9Y2P5 690 aa7□□□□□ -1.29
CD44-204ENST00000279452 YIPF1Q9Y548 306 aa7□□□□□ -1.29
CD44-204ENST00000279452 INSL5Q9Y5Q6 135 aa7□□□□□ -1.29
CD44-204ENST00000279452 SZT2Q5T011 3432 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 PDCD11Q14690 1871 aaKnown RBP6.99□□□□□ -1.29
CD44-204ENST00000279452 MTMR11A4FU01 709 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 N4BP1O75113 896 aaKnown RBP6.99□□□□□ -1.29
CD44-204ENST00000279452 SOAT2O75908 522 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 SEC24AO95486 1093 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 VNN1O95497 513 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 HNRNPA1P09651 372 aaKnown RBP eCLIP6.99□□□□□ -1.29
CD44-204ENST00000279452 BMP1P13497 986 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 ATF2P15336 505 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 CD58P19256 250 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 GTF2H1P32780 548 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 MTIF2P46199 727 aaKnown RBP6.99□□□□□ -1.29
CD44-204ENST00000279452 ALDH1A3P47895 512 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 EPHB3P54753 998 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 CDH8P55286 799 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 CLDN10P78369 228 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 CETN1Q12798 172 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 LRMPQ12912 555 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 DUSP4Q13115 394 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 GPR17Q13304 367 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 PLD1Q13393 1074 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 ORC1Q13415 861 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 VEPH1Q14D04 833 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 ZACNQ401N2 412 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 INTS6LQ5JSJ4 861 aaKnown RBP6.99□□□□□ -1.29
CD44-204ENST00000279452 C1orf220Q5T0J3 134 aa6.99□□□□□ -1.29
CD44-204ENST00000279452 IQCEQ6IPM2 695 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms