RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 HOXC10Q9NYD6 342 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 AGAP1Q9UPQ3 857 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 M0QYV0 167 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 DGAT1O75907 488 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 APRTP07741 180 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 SFNP31947 248 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 ARFIP2P53365 341 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 EPHB1P54762 984 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 TFDP1Q14186 410 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 NBPF12Q5TAG4 269 aaPredicted RBP17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 C9orf131Q5VYM1 1079 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 MTDHQ86UE4 582 aaKnown RBP17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 NME8Q8N427 588 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 BSNDQ8WZ55 320 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 CYP4F11Q9HBI6 524 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 PROSCO94903 275 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 EPHB2P29323 1055 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 PTGIRP43119 386 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 SHC3Q92529 594 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 ADPGKQ9BRR6 497 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 COPEO14579 308 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 ZBED1O96006 694 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 ENO1P06733 434 aaKnown RBP17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 RBP3P10745 1247 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 CTCFP49711 727 aaPredicted RBP17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 CDH8P55286 799 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 MYL6P60660 151 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 ZBTB41Q5SVQ8 909 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 CCNYQ8ND76 341 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 ACTL9Q8TC94 416 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 RAB6BQ9NRW1 208 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 AKT3Q9Y243 479 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 OSBPP22059 807 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 PDE1BQ01064 536 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 CAV1Q03135 178 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 PSMD6Q15008 389 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 SMYD2Q9NRG4 433 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 PCYOX1Q9UHG3 505 aa17.04■□□□□ 0.32
PDZRN3-201ENST00000263666 DCTN3O75935 186 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 NUDT17P0C025 328 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 RPA3P35244 121 aaPredicted RBP17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 OTUD4Q01804 1114 aaKnown RBP17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 PLCB4Q15147 1175 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 ZNF667Q5HYK9 610 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 YTHDF3Q7Z739 585 aaKnown RBP17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 TRIM50Q86XT4 487 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 MYLK2Q9H1R3 596 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 WHRNQ9P202 907 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 XPO7Q9UIA9 1087 aaKnown RBP17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 STRCP1A6NGW2 1772 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 STRCQ7RTU9 1775 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 UMODL1Q5DID0 1318 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 A0A1W2PPM1 405 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 ASAP2O43150 1006 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 PRPSAP2O60256 369 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 ADRA1DP25100 572 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 PGM5Q15124 567 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 CAPRIN2Q6IMN6 1127 aaKnown RBP17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 TMEM161BQ8NDZ6 487 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 ANKRD36BP1Q96IX9 119 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 CYP26B1Q9NR63 512 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 USH1CQ9Y6N9 552 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 ASTN2O75129 1339 aaPredicted RBP17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 P4HA2O15460 535 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 CALRP27797 417 aaKnown RBP17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 NRLP54845 237 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 ITIH4Q14624 930 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 TATDN1Q6P1N9 297 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 ZNF280CQ8ND82 737 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 OR5B17Q8NGF7 314 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 ARMCX1Q9P291 453 aa17.03■□□□□ 0.32
PDZRN3-201ENST00000263666 CCNE2O96020 404 aa17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 SLC1A1P43005 524 aa17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 MRPS9P82933 396 aaKnown RBP17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 EFTUD2Q15029 972 aaKnown RBP eCLIP17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 TAF1BQ53T94 588 aaPredicted RBP17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 ANO5Q75V66 913 aa17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 SPATA18Q8TC71 538 aa17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 CCNA1P78396 465 aa17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 MAPK6Q16659 721 aa17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 BTNL9Q6UXG8 535 aa17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 CCDC60Q8IWA6 550 aaPredicted RBP17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 ART4Q93070 314 aa17.02■□□□□ 0.32
PDZRN3-201ENST00000263666 TIAM2Q8IVF5 1701 aa17.02■□□□□ 0.31
PDZRN3-201ENST00000263666 H0YCG3 227 aa17.02■□□□□ 0.31
PDZRN3-201ENST00000263666 HIRAP54198 1017 aaPredicted RBP17.02■□□□□ 0.31
PDZRN3-201ENST00000263666 NLRP9Q7RTR0 991 aa17.02■□□□□ 0.31
PDZRN3-201ENST00000263666 ZDHHC14Q8IZN3 488 aa17.02■□□□□ 0.31
PDZRN3-201ENST00000263666 FITM2Q8N6M3 262 aa17.02■□□□□ 0.31
PDZRN3-201ENST00000263666 ATP11CQ8NB49 1132 aa17.02■□□□□ 0.31
PDZRN3-201ENST00000263666 FBXO36Q8NEA4 188 aa17.02■□□□□ 0.31
PDZRN3-201ENST00000263666 ZNF606Q8WXB4 792 aa17.02■□□□□ 0.31
PDZRN3-201ENST00000263666 TLCD1Q96CP7 247 aa17.02■□□□□ 0.31
PDZRN3-201ENST00000263666 HEY2Q9UBP5 337 aa17.02■□□□□ 0.31
PDZRN3-201ENST00000263666 ALDH18A1P54886 795 aaKnown RBP17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 NCALDP61601 193 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 BMPR2Q13873 1038 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 ISLR2Q6UXK2 745 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 SDCCAG8Q86SQ7 713 aaPredicted RBP17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 PAF1Q8N7H5 531 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms