RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 POLE2P56282 527 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 AMHR2Q16671 573 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 ZC3H12BQ5HYM0 836 aaKnown RBP9.11□□□□□ -0.95
PTCD3-201ENST00000254630 GJB7Q6PEY0 223 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 FEZF2Q8TBJ5 459 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 RSAD1Q9HA92 442 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 POLLQ9UGP5 575 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 NAGPAQ9UK23 515 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 PPP2R3BQ9Y5P8 575 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 AGTP01019 485 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 RFX5P48382 616 aaPredicted RBP9.11□□□□□ -0.95
PTCD3-201ENST00000254630 TWF1Q12792 350 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 CUL2Q13617 745 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 INPP5AQ14642 412 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 GNASQ5JWF2 1037 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 PTRHD1Q6GMV3 140 aaKnown RBP9.11□□□□□ -0.95
PTCD3-201ENST00000254630 ARMC6Q6NXE6 501 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 C4orf22Q6V702 233 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 SPATA4Q8NEY3 305 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 PXMP2Q9NR77 195 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 E2F8A0AVK6 867 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 UBE2Q2LH0YL09 131 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 SUPT20HL2P0C7V6 817 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 EPHX2P34913 555 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 ALDH7A1P49419 539 aaKnown RBP9.11□□□□□ -0.95
PTCD3-201ENST00000254630 PTK7Q13308 1070 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 BYSLQ13895 437 aaKnown RBP9.11□□□□□ -0.95
PTCD3-201ENST00000254630 PDIA6Q15084 440 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 Q4G0T1 1027 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 CALML6Q8TD86 181 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 ABTB1Q969K4 478 aaPredicted RBP9.11□□□□□ -0.95
PTCD3-201ENST00000254630 NR1H4Q96RI1 486 aaPredicted RBP9.11□□□□□ -0.95
PTCD3-201ENST00000254630 C17orf80Q9BSJ5 609 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 AGPAT5Q9NUQ2 364 aa9.11□□□□□ -0.95
PTCD3-201ENST00000254630 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTCD3-201ENST00000254630 SMG5Q9UPR3 1016 aaKnown RBP9.11□□□□□ -0.95
PTCD3-201ENST00000254630 ARHGEF28Q8N1W1 1705 aaKnown RBP9.11□□□□□ -0.95
PTCD3-201ENST00000254630 EGFRP00533 1210 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 RAP1GAPP47736 663 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 NLRP11P59045 1033 aaKnown RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 MED21Q13503 144 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 RASGRP2Q7LDG7 609 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 L3MBTL3Q96JM7 780 aaPredicted RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 TRIM10Q9UDY6 481 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 MEGF6O75095 1541 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 SSU72P8A0A1W2PR75 194 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 TCP11X1B4DZS4 312 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 ZNF263O14978 683 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 MAPRE1Q15691 268 aaKnown RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 C9orf131Q5VYM1 1079 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 PCNX4Q63HM2 1172 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 ACAD10Q6JQN1 1059 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 CHSY1Q86X52 802 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 COL23A1Q86Y22 540 aaPredicted RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 OTULINQ96BN8 352 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 UBQLN1Q9UMX0 589 aaKnown RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 KIF1AQ12756 1690 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 CHUKO15111 745 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 EFCAB14O75071 495 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 TMEM253P0C7T8 217 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 HSPA1AP0DMV8 641 aaKnown RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 HSPA1BP0DMV9 641 aaKnown RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 PLA2G4AP47712 749 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 TGFB2P61812 414 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 RPS6P62753 249 aaKnown RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 OCA2Q04671 838 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 UGP2Q16851 508 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 PAN2Q504Q3 1202 aaKnown RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 KLHDC7AQ5VTJ3 777 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 C16orf89Q6UX73 402 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 FBXO16Q8IX29 292 aaPredicted RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 ABHD8Q96I13 439 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 ZFYVE19Q96K21 471 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 CHP1Q99653 195 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 FAM118BQ9BPY3 351 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 GPR63Q9BZJ6 419 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 CCDC90BQ9GZT6 254 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 ADAMTS13Q76LX8 1427 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 PJA2O43164 708 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 COMTP21964 271 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 MPZL3Q6UWV2 235 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 RFX8Q6ZV50 586 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 RPAINQ86UA6 219 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 ZNF555Q8NEP9 628 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 OR9Q1Q8NGQ5 310 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 FAM129AQ9BZQ8 928 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 ZSCAN9O15535 394 aaPredicted RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 VTNP04004 478 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 POLBP06746 335 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 CHN1P15882 459 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 SLC9A1P19634 815 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 CDH18Q13634 790 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 RRM2BQ7LG56 351 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 FAM162AQ96A26 154 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 OPTNQ96CV9 577 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 MKNK1Q9BUB5 465 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 APOL5Q9BWW9 433 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 AGO4Q9HCK5 861 aaKnown RBP9.1□□□□□ -0.95
PTCD3-201ENST00000254630 NPHS2Q9NP85 383 aa9.1□□□□□ -0.95
PTCD3-201ENST00000254630 PCDHB2Q9Y5E7 798 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms