RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 PDCD1Q15116 288 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 KIZQ2M2Z5 673 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 LRIT3Q3SXY7 679 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 WDR45BQ5MNZ6 344 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 KIAA1614Q5VZ46 1190 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 CPA6Q8N4T0 437 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 ZNF655Q8N720 491 aaPredicted RBP4.06□□□□□ -1.76
RBM39-201ENST00000253363 ENAHQ8N8S7 591 aaPredicted RBP4.06□□□□□ -1.76
RBM39-201ENST00000253363 GIMAP8Q8ND71 665 aaPredicted RBP4.06□□□□□ -1.76
RBM39-201ENST00000253363 ZFPM2Q8WW38 1151 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 TAF4BQ92750 862 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 SLC5A5Q92911 643 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 TNPO1Q92973 898 aaKnown RBP4.06□□□□□ -1.76
RBM39-201ENST00000253363 DDX11Q96FC9 970 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 DYNLL2Q96FJ2 89 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 TBC1D32Q96NH3 1257 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 DEFB118Q96PH6 123 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 SLX1AQ9BQ83 275 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 LBHD1Q9BQE6 289 aaPredicted RBP4.06□□□□□ -1.76
RBM39-201ENST00000253363 SMURF1Q9HCE7 757 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 CATSPERZQ9NTU4 200 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 RBM28Q9NW13 759 aaKnown RBP4.06□□□□□ -1.76
RBM39-201ENST00000253363 OBP2AQ9NY56 170 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 PRR13Q9NZ81 148 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 B4GALT6Q9UBX8 382 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 CLIP2Q9UDT6 1046 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 KCNH3Q9ULD8 1083 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 RNF112Q9ULX5 631 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 PCDHGB3Q9Y5G1 929 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 CAPN6Q9Y6Q1 641 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 ZSWIM8A7E2V4 1837 aa4.06□□□□□ -1.76
RBM39-201ENST00000253363 FRMPD4Q14CM0 1322 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 SMTNL1A8MU46 457 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 KIAA0355O15063 1070 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 XPOTO43592 962 aaKnown RBP4.05□□□□□ -1.76
RBM39-201ENST00000253363 PRKAB2O43741 272 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 BAIAP3O94812 1187 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 SYPP08247 313 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 PARP1P09874 1014 aaKnown RBP4.05□□□□□ -1.76
RBM39-201ENST00000253363 SUPT20HL2P0C7V6 817 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 SRFP11831 508 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 CYP2B6P20813 491 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 BCL6P41182 706 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 LSSP48449 732 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 SNX16P57768 344 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 PPIGQ13427 754 aaKnown RBP eCLIP4.05□□□□□ -1.761e-15■□□□□ 11.3
RBM39-201ENST00000253363 GALEQ14376 348 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 MBTPS1Q14703 1052 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 FAM133BQ5BKY9 247 aaKnown RBP4.05□□□□□ -1.76
RBM39-201ENST00000253363 PRRT3Q5FWE3 981 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 TSHZ3Q63HK5 1081 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 PSRC1Q6PGN9 363 aaPredicted RBP4.05□□□□□ -1.76
RBM39-201ENST00000253363 MMS22LQ6ZRQ5 1243 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 ANKRD33Q7Z3H0 272 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 SIAH1Q8IUQ4 282 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 FAM20CQ8IXL6 584 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 ANKRD35Q8N283 1001 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 FAM133AQ8N9E0 248 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 NCOA7Q8NI08 942 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.05□□□□□ -1.761e-36■■■■■ 29.5
RBM39-201ENST00000253363 HVCN1Q96D96 273 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 SPZ1Q9BXG8 430 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 AP5M1Q9H0R1 490 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 PORCNQ9H237 461 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 PRO3102Q9H379 93 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 TXNRD2Q9NNW7 524 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 RNF146Q9NTX7 359 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 FBLN5Q9UBX5 448 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 CCPG1Q9ULG6 757 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 MKL2Q9ULH7 1088 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 LTBP2Q14767 1821 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 BAZ2AQ9UIF9 1905 aaKnown RBP4.05□□□□□ -1.76
RBM39-201ENST00000253363 PLXNA1Q9UIW2 1896 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 A0A0D9SFI3 127 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 CCDC196A0A1B0GTZ2 297 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 TMEM82A0PJX8 343 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 GTPBP10A4D1E9 387 aaKnown RBP4.05□□□□□ -1.76
RBM39-201ENST00000253363 C7orf72A4D263 438 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 DVL2O14641 736 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 SGSM2O43147 1006 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 RANBP6O60518 1105 aaKnown RBP4.05□□□□□ -1.76
RBM39-201ENST00000253363 RFPL1O75677 317 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 ARHGEF15O94989 841 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 SNUPNO95149 360 aaKnown RBP4.05□□□□□ -1.76
RBM39-201ENST00000253363 ASGR2P07307 311 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 ZNF865P0CJ78 1059 aaPredicted RBP4.05□□□□□ -1.76
RBM39-201ENST00000253363 COL6A2P12110 1019 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 EN2P19622 333 aaPredicted RBP4.05□□□□□ -1.76
RBM39-201ENST00000253363 CCND1P24385 295 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 EDNRBP24530 442 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 UBA7P41226 1012 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 LIFRP42702 1097 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 STT3AP46977 705 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 FXR1P51114 621 aaKnown RBP eCLIP4.05□□□□□ -1.76
RBM39-201ENST00000253363 BPIFB3P59826 476 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 JAG1P78504 1218 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 IKQ13123 557 aaPredicted RBP4.05□□□□□ -1.76
RBM39-201ENST00000253363 GRM3Q14832 879 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 GRM4Q14833 912 aa4.05□□□□□ -1.76
RBM39-201ENST00000253363 CLUL1Q15846 466 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms