RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Clca4aQ6Q473 924 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Actr5Q80US4 605 aaKnown RBP11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Zfp418Q8BFS8 652 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 UstQ8BUB6 407 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Slc39a13Q8BZH0 361 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Tbrg4Q91YM4 630 aaKnown RBP11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Arl8bQ9CQW2 186 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Q9DAQ4 598 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Dbn1Q9QXS6 706 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Flt1P35969 1333 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Arhgef37A1IGU4 676 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Acnat1A2AKK5 416 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Vmn2r77L7N2B7 854 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Eif3eP60229 445 aaKnown RBP11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 CiitaP79621 1155 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Npas2P97460 816 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ppp4r3cQ3V0Y1 813 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Akap4Q60662 849 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Stx3Q64704 289 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Nup93Q8BJ71 819 aaKnown RBP11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Rps6kc1Q8BLK9 1056 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Atg16l1Q8C0J2 607 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Pcdhb3Q91XZ7 784 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Rpn1Q91YQ5 608 aaKnown RBP11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Hspbp1Q99P31 357 aaKnown RBP11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Atp6v1g1Q9CR51 118 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 AenQ9CZI9 336 aaKnown RBP11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Q9D2Q3 444 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Dctn3Q9Z0Y1 186 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 PrlP06879 226 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Psma2P49722 234 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Cdo1P60334 200 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Usp46P62069 366 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Cdk16Q04735 496 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Rbm20Q3UQS8 1199 aaKnown RBP11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Klra7Q60654 280 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Dsg1aQ61495 1057 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Cspg5Q71M36 566 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Q8C6G1 249 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Cdk5rap3Q99LM2 503 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Angptl2Q9R045 493 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Pdpk1Q9Z2A0 559 aa11.18□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Slc6a16A0A1L1SR47 742 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Gm3893E9Q1I1 302 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Grpel2O88396 224 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 AfmO89020 608 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Glud1P26443 558 aaKnown RBP11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Fam92bQ3V2J0 292 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Trcg1Q58Y74 825 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Atl2Q6PA06 583 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Leg1Q8C6C9 337 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Kcnv2Q8CFS6 562 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Stoml1Q8CI66 399 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 ZwilchQ8R060 589 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Nek8Q91ZR4 698 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 XkQ9QXY7 446 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 EmcnQ9R0H2 261 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Epb41l3Q9WV92 929 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 C4bP01029 1738 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Dnmt3aO88508 908 aaKnown RBP11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Slc10a3P21129 473 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ptk2P34152 1090 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Wdhd1P59328 1117 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 ItkQ03526 625 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Lrfn1Q2WF71 766 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 E2f8Q58FA4 860 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Fbxo10Q7TQF2 950 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Mark4Q8CIP4 752 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Gtse1Q8R080 741 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 NonoQ99K48 473 aaKnown RBP11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Bbs2Q9CWF6 721 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Slc22a3Q9WTW5 551 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Sucla2Q9Z2I9 463 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Gm7942L7N277 499 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Cdh16O88338 830 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Rps6ka3P18654 740 aaKnown RBP11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Rab17P35292 214 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Il12bP43432 335 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Olfm3P63056 478 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Trim71Q1PSW8 855 aaKnown RBP11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Plekhf1Q3TB82 279 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 GsapQ3TCV3 858 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ppp1r14bQ62084 147 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Cypt2Q6P924 180 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Trpm4Q7TN37 1213 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Olfr792Q7TRH9 311 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Slc6a15Q8BG16 729 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Fbxo28Q8BIG4 368 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 NcaphQ8C156 731 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Nudt8Q9CR24 210 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Fip1l1Q9D824 581 aaKnown RBP11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 MajinQ9D992 256 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Strn3Q9ERG2 796 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 ArcQ9WV31 396 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Map3k15A2AQW0 1331 aa11.17□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ttll10A4Q9F3 704 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Krt36B1AQ75 473 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Lonrf1D3YY23 762 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Nr1i3O35627 358 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Capn6O35646 641 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms