RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Irx2P81066 474 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Il17raQ60943 864 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tmem134Q8R0J4 195 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Agap3Q8VHH5 910 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 WaslQ91YD9 501 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rfc4Q99J62 364 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 YwhabQ9CQV8 246 aaKnown RBP14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tmem192Q9CXT7 266 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Akirin2B1AXD8 201 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 ClockO08785 855 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Msx3P70354 204 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tatdn3Q3U1C6 294 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cyfip1Q7TMB8 1253 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Kirrel3Q8BR86 778 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rbp7Q9EPC5 134 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Synj2Q9D2G5 1434 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 B020011L13RikA0A087WQI7 412 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Garnl3Q3V0G7 1038 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gpr139Q80UC8 345 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Dennd2aQ8C4S8 1000 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Katnal2Q9D3R6 539 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Mtnd3P03899 115 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Mageb5Q14AN0 366 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Als2clQ60I26 952 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Vmn1r191Q8K4D0 298 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Vps11Q91W86 941 aaKnown RBP14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Kat6bQ8BRB7 1872 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rgs4O08899 205 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 BC030870Q3V2G4 71 aa14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 CopaQ8CIE6 1224 aaKnown RBP14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Mrpl19Q9D338 292 aaKnown RBP14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 SmapQ9R0P4 181 aaKnown RBP14.52□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Samd11Q1RNF8 542 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ces3aQ63880 571 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Olfr297Q7TS07 310 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Nckap1lQ8K1X4 1134 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ces3bQ8VCU1 571 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Psma4Q9R1P0 261 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Stk25Q9Z2W1 426 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Map3k15A2AQW0 1331 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rusc2Q80U22 1514 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rrn3B2RS91 656 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Alppl2P24823 529 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Kcnb1Q03717 857 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Zscan26Q5RJ54 466 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Man1c1Q6NXK9 625 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rps6ka6Q7TPS0 764 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Mfn2Q80U63 757 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ttc26Q8BS45 554 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 TbcdQ8BYA0 1196 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Dnajc5gQ8C632 165 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Fam20aQ8CID3 541 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Plac9Q8K262 108 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Olfr474Q8VFC9 310 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Eaf2Q91ZD6 262 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Pgm3Q9CYR6 542 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm5415E9PXF3 478 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tmem165P52875 323 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Fam49aQ8BHZ0 323 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 PolrmtQ8BKF1 1207 aaKnown RBP14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Fgd2Q8BY35 655 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 HpdlQ8K248 371 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Hsf3D0VYS2 492 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Vmn2r38G3UYA8 861 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Vmn2r33K7N705 861 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Vmn2r44L7N2E1 861 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Anxa8O35640 327 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tpp1O89023 562 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ets2P15037 468 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 9130409I23RikQ3TS87 320 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Xpo1Q6P5F9 1071 aaKnown RBP14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Zfp341Q6PGC9 846 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Cadm1Q8R5M8 456 aaKnown RBP14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 CbsQ91WT9 561 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Pcdhga10Q91XY9 930 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 RalbQ9JIW9 206 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Lbhd1A0A087WPA0 259 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 TbckQ8BM85 762 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Pkn2Q8BWW9 983 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Zbed5B2RPU8 756 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 InhbeO08717 350 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Vti1bO88384 232 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 ZfrO88532 1074 aaKnown RBP14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Nr2c1Q505F1 590 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 SnrpaQ62189 287 aaKnown RBP14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ccnt2Q7TQK0 723 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Dpp3Q99KK7 738 aa14.51□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Lnx1O70263 728 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Scg3P47867 471 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Setd4P58467 439 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Znf827Q505G8 1078 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Plcg1Q62077 1302 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tada2bD3Z4Z0 420 aaKnown RBP14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 HdcP23738 662 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Nr5a1P33242 462 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Cdc25aP48964 514 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 9930111J21Rik1Q5SVP0 844 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tfdp2Q64163 446 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rrm2bQ6PEE3 351 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Cpa1Q7TPZ8 419 aa14.5□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms