RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C TCA17P32613 152 aa5.14□□□□□ -1.59
VPS4YPR173C SHB17P36136 271 aaKnown RBP5.14□□□□□ -1.59
VPS4YPR173C WSC4P38739 605 aa5.14□□□□□ -1.59
VPS4YPR173C TIF34P40217 347 aaKnown RBP5.14□□□□□ -1.59
VPS4YPR173C YGR126WP53274 230 aa5.14□□□□□ -1.59
VPS4YPR173C YNR061CP53747 219 aa5.14□□□□□ -1.59
VPS4YPR173C STD1Q02794 444 aa5.14□□□□□ -1.59
VPS4YPR173C RCE1Q03530 315 aa5.14□□□□□ -1.59
VPS4YPR173C YMR210WQ03649 449 aa5.14□□□□□ -1.59
VPS4YPR173C DPB4Q04603 196 aaKnown RBP5.14□□□□□ -1.59
VPS4YPR173C FRQ1Q06389 190 aa5.14□□□□□ -1.59
VPS4YPR173C ATG33Q06485 197 aa5.14□□□□□ -1.59
VPS4YPR173C STP4Q07351 490 aa5.14□□□□□ -1.59
VPS4YPR173C NIP7Q08962 181 aaKnown RBP5.14□□□□□ -1.59
VPS4YPR173C HUT1Q12520 339 aa5.14□□□□□ -1.59
VPS4YPR173C YHR214C-EQ8TGK0 99 aa5.14□□□□□ -1.59
VPS4YPR173C COX5BP00425 151 aa5.13□□□□□ -1.59
VPS4YPR173C RPL9AP05738 191 aaKnown RBP5.13□□□□□ -1.59
VPS4YPR173C RPS22AP0C0W1 130 aaKnown RBP5.13□□□□□ -1.59
VPS4YPR173C HAP3P13434 144 aa5.13□□□□□ -1.59
VPS4YPR173C PDX1P16451 410 aa5.13□□□□□ -1.59
VPS4YPR173C IMG1P25626 169 aa5.13□□□□□ -1.59
VPS4YPR173C EMP70P32802 667 aa5.13□□□□□ -1.59
VPS4YPR173C RTC3P38804 111 aaPredicted RBP5.13□□□□□ -1.59
VPS4YPR173C PFS1P38872 237 aa5.13□□□□□ -1.59
VPS4YPR173C YHR210CP38893 341 aa5.13□□□□□ -1.59
VPS4YPR173C CCS1P40202 249 aaKnown RBP5.13□□□□□ -1.59
VPS4YPR173C RPL9BP51401 191 aaKnown RBP5.13□□□□□ -1.59
VPS4YPR173C CWC27Q02770 301 aa5.13□□□□□ -1.59
VPS4YPR173C YPL039WQ03080 316 aa5.13□□□□□ -1.59
VPS4YPR173C YDR102CQ03864 110 aa5.13□□□□□ -1.59
VPS4YPR173C SEI1Q06058 285 aa5.13□□□□□ -1.59
VPS4YPR173C YFT2Q06676 274 aa5.13□□□□□ -1.59
VPS4YPR173C RDL2Q08742 149 aaKnown RBP5.13□□□□□ -1.59
VPS4YPR173C USB1Q12208 290 aaKnown RBP5.13□□□□□ -1.59
VPS4YPR173C FRE7Q12333 620 aa5.13□□□□□ -1.59
VPS4YPR173C PAR32Q12515 295 aaKnown RBP5.13□□□□□ -1.59
VPS4YPR173C POR1P04840 283 aaKnown RBP5.12□□□□□ -1.59
VPS4YPR173C PCL1P24867 279 aa5.12□□□□□ -1.59
VPS4YPR173C YKL102CP34249 101 aa5.12□□□□□ -1.59
VPS4YPR173C BAT1P38891 393 aaKnown RBP5.12□□□□□ -1.59
VPS4YPR173C RPB11P38902 120 aa5.12□□□□□ -1.59
VPS4YPR173C PRM5P40476 318 aa5.12□□□□□ -1.59
VPS4YPR173C CUP9P41817 306 aa5.12□□□□□ -1.59
VPS4YPR173C LOC1P43586 204 aaPredicted RBP5.12□□□□□ -1.59
VPS4YPR173C GPI2P46961 280 aa5.12□□□□□ -1.59
VPS4YPR173C TTI2P47168 421 aa5.12□□□□□ -1.59
VPS4YPR173C RPN14P53196 417 aa5.12□□□□□ -1.59
VPS4YPR173C SWS2P53937 143 aa5.12□□□□□ -1.59
VPS4YPR173C TSA2Q04120 196 aa5.12□□□□□ -1.59
VPS4YPR173C YOR186WQ08560 144 aa5.12□□□□□ -1.59
VPS4YPR173C PRP46Q12417 451 aaPredicted RBP5.12□□□□□ -1.59
VPS4YPR173C YGL010WP25338 174 aa5.11□□□□□ -1.59
VPS4YPR173C DAD2P36162 133 aa5.11□□□□□ -1.59
VPS4YPR173C SWD3P38123 315 aa5.11□□□□□ -1.59
VPS4YPR173C COX15P40086 486 aa5.11□□□□□ -1.59
VPS4YPR173C YGR269WP40326 108 aa5.11□□□□□ -1.59
VPS4YPR173C HIT1P46973 164 aa5.11□□□□□ -1.59
VPS4YPR173C CIS3P47001 227 aa5.11□□□□□ -1.59
VPS4YPR173C BNA2P47125 453 aa5.11□□□□□ -1.59
VPS4YPR173C TVP18Q04767 167 aa5.11□□□□□ -1.59
VPS4YPR173C PRP11Q07350 266 aaPredicted RBP5.11□□□□□ -1.59
VPS4YPR173C NDE2Q07500 545 aa5.11□□□□□ -1.59
VPS4YPR173C NAT5Q08689 176 aa5.11□□□□□ -1.59
VPS4YPR173C GRE1Q08969 168 aa5.11□□□□□ -1.59
VPS4YPR173C SWM1Q12379 170 aa5.11□□□□□ -1.59
VPS4YPR173C YBR255C-AQ3E776 120 aa5.11□□□□□ -1.59
VPS4YPR173C CYR1P08678 2026 aaKnown RBP5.1□□□□□ -1.59
VPS4YPR173C BET2P20133 325 aa5.1□□□□□ -1.59
VPS4YPR173C SPS18P32572 300 aa5.1□□□□□ -1.59
VPS4YPR173C YBL059WP34224 193 aa5.1□□□□□ -1.59
VPS4YPR173C FMO1P38866 432 aa5.1□□□□□ -1.59
VPS4YPR173C CYB5P40312 120 aa5.1□□□□□ -1.59
VPS4YPR173C ATF1P40353 525 aa5.1□□□□□ -1.59
VPS4YPR173C CDC40P40968 455 aaPredicted RBP5.1□□□□□ -1.59
VPS4YPR173C SNO3P43544 222 aa5.1□□□□□ -1.59
VPS4YPR173C YJR096WP47137 282 aa5.1□□□□□ -1.59
VPS4YPR173C MCH1Q07376 486 aa5.1□□□□□ -1.59
VPS4YPR173C RFU1Q08003 200 aa5.1□□□□□ -1.59
VPS4YPR173C AKR2Q12013 749 aa5.1□□□□□ -1.59
VPS4YPR173C FLO9P39712 1322 aa5.09□□□□□ -1.59
VPS4YPR173C YKL097CP34245 136 aa5.09□□□□□ -1.59
VPS4YPR173C MIX23P38162 196 aa5.09□□□□□ -1.59
VPS4YPR173C QDR3P38227 689 aa5.09□□□□□ -1.59
VPS4YPR173C YER010CP40011 234 aa5.09□□□□□ -1.59
VPS4YPR173C YIL086CP40503 102 aa5.09□□□□□ -1.59
VPS4YPR173C MSY1P48527 492 aa5.09□□□□□ -1.59
VPS4YPR173C CRH1P53301 507 aa5.09□□□□□ -1.59
VPS4YPR173C YPL077CQ02831 240 aa5.09□□□□□ -1.59
VPS4YPR173C NAT3Q06504 195 aa5.09□□□□□ -1.59
VPS4YPR173C PAU23Q07987 124 aa5.09□□□□□ -1.59
VPS4YPR173C YOR292CQ08743 309 aa5.09□□□□□ -1.59
VPS4YPR173C PAU17Q12370 124 aa5.09□□□□□ -1.59
VPS4YPR173C DFR1P07807 211 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
VPS4YPR173C SUA7P29055 345 aaPredicted RBP5.08□□□□□ -1.6
VPS4YPR173C YKL187CP34231 750 aa5.08□□□□□ -1.6
VPS4YPR173C PAU16P35994 123 aa5.08□□□□□ -1.6
VPS4YPR173C SRX1P36077 127 aa5.08□□□□□ -1.6
VPS4YPR173C NTC20P38302 140 aaPredicted RBP5.08□□□□□ -1.6
VPS4YPR173C YMR262WP38430 313 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms