RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeastyeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPN1YPR133C ATG40Q99325 256 aa3.27□□□□□ -1.89
SPN1YPR133C ADH2P00331 348 aaKnown RBP3.26□□□□□ -1.89
SPN1YPR133C MATALPHA1P0CY06 175 aa3.26□□□□□ -1.89
SPN1YPR133C HMLALPHA1P0CY07 175 aa3.26□□□□□ -1.89
SPN1YPR133C TIP1P27654 210 aaPredicted RBP3.26□□□□□ -1.89
SPN1YPR133C NDC1P32500 655 aa3.26□□□□□ -1.89
SPN1YPR133C YKL075CP36083 450 aa3.26□□□□□ -1.89
SPN1YPR133C CCS1P40202 249 aaKnown RBP3.26□□□□□ -1.89
SPN1YPR133C YGL204CP53089 101 aa3.26□□□□□ -1.89
SPN1YPR133C ODC1Q03028 310 aa3.26□□□□□ -1.89
SPN1YPR133C IZH1Q03419 316 aa3.26□□□□□ -1.89
SPN1YPR133C GTO3Q04806 366 aa3.26□□□□□ -1.89
SPN1YPR133C YLR283WQ05867 314 aa3.26□□□□□ -1.89
SPN1YPR133C NEJ1Q06148 342 aa3.26□□□□□ -1.89
SPN1YPR133C PEX30Q06169 523 aa3.26□□□□□ -1.89
SPN1YPR133C NOC4Q06512 552 aaPredicted RBP3.26□□□□□ -1.89
SPN1YPR133C TPT1Q12272 230 aaKnown RBP3.26□□□□□ -1.89
SPN1YPR133C YPL119C-AQ3E751 87 aa3.26□□□□□ -1.89
SPN1YPR133C STF2P16965 84 aa3.25□□□□□ -1.89
SPN1YPR133C YCP4P25349 247 aaKnown RBP3.25□□□□□ -1.89
SPN1YPR133C YCR101CP25607 182 aa3.25□□□□□ -1.89
SPN1YPR133C SNC2P33328 115 aa3.25□□□□□ -1.89
SPN1YPR133C YKL063CP35725 167 aa3.25□□□□□ -1.89
SPN1YPR133C RCN1P36054 211 aa3.25□□□□□ -1.89
SPN1YPR133C GWT1P47026 490 aa3.25□□□□□ -1.89
SPN1YPR133C TOS8P53147 276 aa3.25□□□□□ -1.89
SPN1YPR133C LST7P53237 242 aa3.25□□□□□ -1.89
SPN1YPR133C RRP17Q04031 235 aaPredicted RBP3.25□□□□□ -1.89
SPN1YPR133C NMA1Q06178 401 aaKnown RBP3.25□□□□□ -1.89
SPN1YPR133C MCH1Q07376 486 aa3.25□□□□□ -1.89
SPN1YPR133C TFC7Q12415 435 aa3.25□□□□□ -1.89
SPN1YPR133C YOR192C-CQ3E736 78 aa3.25□□□□□ -1.89
SPN1YPR133C COX9P07255 59 aa3.24□□□□□ -1.89
SPN1YPR133C MRP1P10662 321 aaKnown RBP3.24□□□□□ -1.89
SPN1YPR133C POP5P28005 173 aa3.24□□□□□ -1.89
SPN1YPR133C ACB1P31787 87 aa3.24□□□□□ -1.89
SPN1YPR133C SPS18P32572 300 aa3.24□□□□□ -1.89
SPN1YPR133C SWD3P38123 315 aa3.24□□□□□ -1.89
SPN1YPR133C AVT6P40074 448 aa3.24□□□□□ -1.89
SPN1YPR133C AIM24P47127 394 aa3.24□□□□□ -1.89
SPN1YPR133C PAU12P53343 120 aa3.24□□□□□ -1.89
SPN1YPR133C YDR274CP87283 123 aa3.24□□□□□ -1.89
SPN1YPR133C YMR099CQ03161 297 aaKnown RBP3.24□□□□□ -1.89
SPN1YPR133C FIT1Q04433 528 aa3.24□□□□□ -1.89
SPN1YPR133C YMR252CQ04814 134 aa3.24□□□□□ -1.89
SPN1YPR133C BER1Q06688 274 aaKnown RBP3.24□□□□□ -1.89
SPN1YPR133C ASR1Q06834 288 aa3.24□□□□□ -1.89
SPN1YPR133C YPD1Q07688 167 aa3.24□□□□□ -1.89
SPN1YPR133C LOT6Q07923 191 aa3.24□□□□□ -1.89
SPN1YPR133C TIM18Q08749 192 aa3.24□□□□□ -1.89
SPN1YPR133C ATX2Q12067 313 aa3.24□□□□□ -1.89
SPN1YPR133C IDP1P21954 428 aaKnown RBP3.23□□□□□ -1.89
SPN1YPR133C GPX2P38143 162 aa3.23□□□□□ -1.89
SPN1YPR133C UMP1P38293 148 aa3.23□□□□□ -1.89
SPN1YPR133C YBR285WP38354 144 aa3.23□□□□□ -1.89
SPN1YPR133C MRPL49P40858 161 aaPredicted RBP3.23□□□□□ -1.89
SPN1YPR133C YCH1P42937 148 aa3.23□□□□□ -1.89
SPN1YPR133C KEG1P43614 200 aa3.23□□□□□ -1.89
SPN1YPR133C RPL9BP51401 191 aaKnown RBP3.23□□□□□ -1.89
SPN1YPR133C GRX5Q02784 150 aa3.23□□□□□ -1.89
SPN1YPR133C RTT103Q05543 409 aa3.23□□□□□ -1.89
SPN1YPR133C PAM18Q07914 168 aa3.23□□□□□ -1.89
SPN1YPR133C YPL199CQ08954 240 aa3.23□□□□□ -1.89
SPN1YPR133C CAP2P13517 287 aa3.22□□□□□ -1.89
SPN1YPR133C GRX2P17695 143 aaKnown RBP3.22□□□□□ -1.89
SPN1YPR133C FUN26P31381 517 aa3.22□□□□□ -1.89
SPN1YPR133C ARO7P32178 256 aa3.22□□□□□ -1.89
SPN1YPR133C AIM29P36154 155 aa3.22□□□□□ -1.89
SPN1YPR133C PAU24P38155 120 aa3.22□□□□□ -1.89
SPN1YPR133C MPC2P38857 129 aa3.22□□□□□ -1.89
SPN1YPR133C MST28P39552 234 aa3.22□□□□□ -1.89
SPN1YPR133C YRB2P40517 327 aa3.22□□□□□ -1.89
SPN1YPR133C YGR210CP42942 411 aa3.22□□□□□ -1.89
SPN1YPR133C PAM16P42949 149 aa3.22□□□□□ -1.89
SPN1YPR133C GNA1P43577 159 aaPredicted RBP3.22□□□□□ -1.89
SPN1YPR133C YPL080CQ02826 108 aa3.22□□□□□ -1.89
SPN1YPR133C TDA1Q03533 586 aa3.22□□□□□ -1.89
SPN1YPR133C PBP4Q07362 185 aaKnown RBP3.22□□□□□ -1.89
SPN1YPR133C NDE2Q07500 545 aa3.22□□□□□ -1.89
SPN1YPR133C SDO1Q07953 250 aaKnown RBP3.22□□□□□ -1.89
SPN1YPR133C YOL118CQ08259 102 aa3.22□□□□□ -1.89
SPN1YPR133C DGK1Q12382 290 aa3.22□□□□□ -1.89
SPN1YPR133C YOS1Q3E834 85 aa3.22□□□□□ -1.89
SPN1YPR133C MRS3P10566 314 aa3.21□□□□□ -1.9
SPN1YPR133C FUS3P16892 353 aaKnown RBP3.21□□□□□ -1.9
SPN1YPR133C MRS4P23500 304 aa3.21□□□□□ -1.9
SPN1YPR133C BUD23P25627 275 aaPredicted RBP3.21□□□□□ -1.9
SPN1YPR133C HYM1P32464 399 aa3.21□□□□□ -1.9
SPN1YPR133C YBL010CP32788 280 aa3.21□□□□□ -1.9
SPN1YPR133C TIR2P33890 251 aa3.21□□□□□ -1.9
SPN1YPR133C YKR045CP36138 183 aa3.21□□□□□ -1.9
SPN1YPR133C YHK8P38776 514 aa3.21□□□□□ -1.9
SPN1YPR133C GEP4P38812 185 aa3.21□□□□□ -1.9
SPN1YPR133C PCL6P40038 420 aa3.21□□□□□ -1.9
SPN1YPR133C COX15P40086 486 aa3.21□□□□□ -1.9
SPN1YPR133C GIS2P53849 153 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
SPN1YPR133C ATG17Q06410 417 aa3.21□□□□□ -1.9
SPN1YPR133C RPL42AP0CX27 106 aaKnown RBP3.2□□□□□ -1.9
SPN1YPR133C RPL42BP0CX28 106 aaKnown RBP3.2□□□□□ -1.9
SPN1YPR133C ATR1P13090 542 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms