RNA–Protein interactions for RNA: YPL115C

BEM3, Transcript of Rho GTPase activating protein (RhoGAP), yeast

Gene BEM3, Length 3,387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BEM3	YPL115C	UBR1	P19812	1950 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	RSF2	P46974	1380 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	FBA1	P14540	359 aa	Known RBP	0.24	□□□□□ -2.37
BEM3	YPL115C	PHO85	P17157	305 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	RPB4	P20433	221 aa	Predicted RBP	0.24	□□□□□ -2.37
BEM3	YPL115C	NTF2	P33331	125 aa	Known RBP	0.24	□□□□□ -2.37
BEM3	YPL115C	AIM2	P39721	246 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	YAR1	P46683	200 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	OST2	P46964	130 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	YGR219W	P53307	113 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	PGA2	P53903	129 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	YNL046W	P53956	172 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	TRM44	Q02648	567 aa	Known RBP	0.24	□□□□□ -2.37
BEM3	YPL115C	YMR315W	Q04869	349 aa	Known RBP	0.24	□□□□□ -2.37
BEM3	YPL115C	FAR8	Q05040	523 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	NOC4	Q06512	552 aa	Predicted RBP	0.24	□□□□□ -2.37
BEM3	YPL115C	RUD3	Q12234	484 aa	Known RBP	0.24	□□□□□ -2.37
BEM3	YPL115C	EMP46	Q12396	444 aa		0.24	□□□□□ -2.37
BEM3	YPL115C	COS2	P0CX12	379 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	COS3	P0CX13	379 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	KSS1	P14681	368 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	SRY1	P36007	326 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	PAM17	P36147	197 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YHL042W	P38729	150 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	SMD3	P43321	101 aa	Known RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	APS3	P47064	194 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YJR111C	P47148	283 aa	Known RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	UBC12	P52491	188 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	NBP35	P52920	328 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YGL235W	P53071	178 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YGR026W	P53217	278 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	CWC21	Q03375	135 aa	Known RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	YMR295C	Q03559	197 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YML108W	Q03759	105 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	MRPS8	Q03799	155 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	SYC1	Q08553	188 aa	Predicted RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	DGA1	Q08650	418 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	USB1	Q12208	290 aa	Known RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	EMC6	Q12431	108 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	LAA1	P39526	2014 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	SGA1	P08019	549 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	RPL40A	P0CH08	128 aa	Known RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	RPL40B	P0CH09	128 aa	Known RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	CKS1	P20486	150 aa	Known RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	RFA3	P26755	122 aa	Known RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	MEI4	P29467	408 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	APS1	P35181	156 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	UPS2	P35200	230 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YKL075C	P36083	450 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	MRPL28	P36527	147 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YER189W	P40104	122 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YPL073C	P40323	161 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	RIM9	Q04734	239 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YLR283W	Q05867	314 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	CSM4	Q08955	156 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	TPO4	Q12256	659 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YOR020W-A	Q3E824	90 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	NCB2	Q92317	146 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	SRB8	P25648	1427 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	SPT3	P06844	337 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	RPO26	P20435	155 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	PEX4	P29340	183 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	SCM4	P32564	187 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	ECM13	P38195	257 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	MSS2	P40990	351 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	RPL33B	P41056	107 aa	Known RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	GLC8	P41818	229 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YAE1	P47118	141 aa	Predicted RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	ERG25	P53045	309 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	MRH4	P53166	561 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YNL247W	P53852	767 aa	Known RBP	0.23	□□□□□ -2.37
BEM3	YPL115C	PEX12	Q04370	399 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YLR036C	Q07986	203 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	LCL2	Q08045	131 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	YNG1	Q08465	219 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	GET4	Q12125	312 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	PDR18	P53756	1333 aa		0.23	□□□□□ -2.37
BEM3	YPL115C	ERD2	P18414	219 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	YCL042W	P25572	119 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	PTC1	P35182	281 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	YCR087C-A	P37263	153 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	FMP23	P38231	175 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	YHL026C	P38740	315 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	YER034W	P40022	185 aa	Known RBP	0.22	□□□□□ -2.37
BEM3	YPL115C	AYR1	P40471	297 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	YJR056C	P47115	236 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	HAM1	P47119	197 aa	Known RBP	0.22	□□□□□ -2.37
BEM3	YPL115C	VMA10	P48836	114 aa	Known RBP	0.22	□□□□□ -2.37
BEM3	YPL115C	DAD4	P69851	72 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	PET191	Q02772	108 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	SRL4	Q03085	281 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	SNO1	Q03144	224 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	RUB1	Q03919	77 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	KRE28	Q04431	385 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	MAK31	P23059	88 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.22	□□□□□ -2.37	not detected
BEM3	YPL115C	COS8	P38723	381 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	YHR022C	P38763	256 aa		0.22	□□□□□ -2.37
BEM3	YPL115C	EDC3	P39998	551 aa	Known RBP	0.22	□□□□□ -2.37
BEM3	YPL115C	FLX1	P40464	311 aa		0.22	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms