RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W MIC26P50087 233 aa3.18□□□□□ -1.9
SWI1YPL016W WSC2P53832 503 aa3.18□□□□□ -1.9
SWI1YPL016W PGA1P53896 198 aa3.18□□□□□ -1.9
SWI1YPL016W ELC1Q03071 99 aa3.18□□□□□ -1.9
SWI1YPL016W TY2A-DR2Q03483 438 aa3.18□□□□□ -1.9
SWI1YPL016W NOC4Q06512 552 aaPredicted RBP3.18□□□□□ -1.9
SWI1YPL016W MCH1Q07376 486 aa3.18□□□□□ -1.9
SWI1YPL016W TY2A-BQ12260 438 aa3.18□□□□□ -1.9
SWI1YPL016W TY2A-OR2Q12293 438 aa3.18□□□□□ -1.9
SWI1YPL016W TY2A-DR1Q12392 438 aa3.18□□□□□ -1.9
SWI1YPL016W TY2A-OR1Q12439 438 aa3.18□□□□□ -1.9
SWI1YPL016W TY2A-DR3Q99303 438 aa3.18□□□□□ -1.9
SWI1YPL016W PDE1P22434 369 aa3.18□□□□□ -1.9
SWI1YPL016W YSR3P23501 404 aa3.18□□□□□ -1.9
SWI1YPL016W YCR023CP25351 611 aa3.18□□□□□ -1.9
SWI1YPL016W MKK1P32490 508 aa3.18□□□□□ -1.9
SWI1YPL016W YKL107WP34251 309 aa3.18□□□□□ -1.9
SWI1YPL016W YHR097CP38809 366 aaKnown RBP3.18□□□□□ -1.9
SWI1YPL016W YEL073CP39974 107 aa3.18□□□□□ -1.9
SWI1YPL016W EGT2P42835 1041 aa3.18□□□□□ -1.9
SWI1YPL016W SBH2P52871 88 aa3.18□□□□□ -1.9
SWI1YPL016W COX18P53239 316 aa3.18□□□□□ -1.9
SWI1YPL016W TFS1P14306 219 aa3.18□□□□□ -1.9
SWI1YPL016W CSE2P33308 149 aa3.18□□□□□ -1.9
SWI1YPL016W REC104P33323 182 aa3.18□□□□□ -1.9
SWI1YPL016W POP8P38208 133 aa3.18□□□□□ -1.9
SWI1YPL016W PHO88P38264 188 aaPredicted RBP3.18□□□□□ -1.9
SWI1YPL016W TRR2P38816 342 aa3.18□□□□□ -1.9
SWI1YPL016W RPL13BP40212 199 aaKnown RBP3.18□□□□□ -1.9
SWI1YPL016W RPL21AQ02753 160 aaKnown RBP3.18□□□□□ -1.9
SWI1YPL016W SNO4Q04902 237 aa3.18□□□□□ -1.9
SWI1YPL016W YPL260WQ08977 551 aa3.18□□□□□ -1.9
SWI1YPL016W HSP32Q08992 237 aa3.18□□□□□ -1.9
SWI1YPL016W RPL21BQ12672 160 aaKnown RBP3.18□□□□□ -1.9
SWI1YPL016W COA6Q3E846 104 aa3.18□□□□□ -1.9
SWI1YPL016W CHO1P08456 276 aa3.17□□□□□ -1.9
SWI1YPL016W CPT1P17898 393 aa3.17□□□□□ -1.9
SWI1YPL016W PAU12P53343 120 aa3.17□□□□□ -1.9
SWI1YPL016W MRPL51Q06090 140 aaPredicted RBP3.17□□□□□ -1.9
SWI1YPL016W ATG33Q06485 197 aa3.17□□□□□ -1.9
SWI1YPL016W SYM1Q06563 197 aa3.17□□□□□ -1.9
SWI1YPL016W NDJ1Q12366 352 aa3.17□□□□□ -1.9
SWI1YPL016W YKR104WP0CE69 306 aa3.17□□□□□ -1.9
SWI1YPL016W PCL1P24867 279 aa3.17□□□□□ -1.9
SWI1YPL016W MRPL27P36526 146 aaPredicted RBP3.17□□□□□ -1.9
SWI1YPL016W SLM6P38343 150 aa3.17□□□□□ -1.9
SWI1YPL016W VBA2P38358 474 aaKnown RBP3.17□□□□□ -1.9
SWI1YPL016W YHR138CP38841 114 aaPredicted RBP3.17□□□□□ -1.9
SWI1YPL016W YER085CP40058 173 aa3.17□□□□□ -1.9
SWI1YPL016W PRY1P47032 299 aa3.17□□□□□ -1.9
SWI1YPL016W HSV2P50079 448 aaPredicted RBP3.17□□□□□ -1.9
SWI1YPL016W BOL2P53082 120 aa3.17□□□□□ -1.9
SWI1YPL016W CAX4P53223 239 aa3.17□□□□□ -1.9
SWI1YPL016W MSO1P53604 210 aaKnown RBP3.17□□□□□ -1.9
SWI1YPL016W RHO5P53879 331 aaKnown RBP3.17□□□□□ -1.9
SWI1YPL016W GRH1Q04410 372 aaKnown RBP3.17□□□□□ -1.9
SWI1YPL016W YPR098CQ06089 161 aa3.17□□□□□ -1.9
SWI1YPL016W YLR456WQ06199 204 aa3.17□□□□□ -1.9
SWI1YPL016W FOL3Q12676 427 aaPredicted RBP3.17□□□□□ -1.9
SWI1YPL016W MDL1P33310 695 aa3.17□□□□□ -1.9
SWI1YPL016W DOG1P38774 246 aa3.17□□□□□ -1.9
SWI1YPL016W RPP1P38786 293 aa3.17□□□□□ -1.9
SWI1YPL016W UBX6P47049 396 aa3.17□□□□□ -1.9
SWI1YPL016W YNL140CP53910 189 aa3.17□□□□□ -1.9
SWI1YPL016W PIR3Q03180 325 aa3.17□□□□□ -1.9
SWI1YPL016W CRD1Q07560 283 aa3.17□□□□□ -1.9
SWI1YPL016W XYL2Q07993 356 aa3.17□□□□□ -1.9
SWI1YPL016W YIR021W-AQ3E739 70 aa3.17□□□□□ -1.9
SWI1YPL016W YMR316C-AI2HB70 103 aa3.16□□□□□ -1.9
SWI1YPL016W URA5P13298 226 aaKnown RBP3.16□□□□□ -1.9
SWI1YPL016W SWD2P36104 329 aaPredicted RBP3.16□□□□□ -1.9
SWI1YPL016W YGL230CP53074 147 aa3.16□□□□□ -1.9
SWI1YPL016W DGA1Q08650 418 aa3.16□□□□□ -1.9
SWI1YPL016W PFA4Q12006 378 aa3.16□□□□□ -1.9
SWI1YPL016W ODC2Q99297 307 aa3.16□□□□□ -1.9
SWI1YPL016W SRX1P36077 127 aa3.16□□□□□ -1.9
SWI1YPL016W PDR16P53860 351 aaKnown RBP3.16□□□□□ -1.9
SWI1YPL016W YMR178WQ03219 274 aaKnown RBP3.16□□□□□ -1.9
SWI1YPL016W TAZ1Q06510 381 aa3.16□□□□□ -1.9
SWI1YPL016W YDR119W-AQ2V2P9 66 aa3.16□□□□□ -1.9
SWI1YPL016W GLT1Q12680 2145 aaKnown RBP3.16□□□□□ -1.9
SWI1YPL016W CDC21P06785 304 aa3.16□□□□□ -1.9
SWI1YPL016W GAL2P13181 574 aa3.16□□□□□ -1.9
SWI1YPL016W ERG8P24521 451 aa3.16□□□□□ -1.9
SWI1YPL016W TRX3P25372 127 aa3.16□□□□□ -1.9
SWI1YPL016W OCH1P31755 480 aa3.16□□□□□ -1.9
SWI1YPL016W FRM2P37261 193 aa3.16□□□□□ -1.9
SWI1YPL016W ECM14P38836 430 aa3.16□□□□□ -1.9
SWI1YPL016W HUA1P40325 198 aa3.16□□□□□ -1.9
SWI1YPL016W RPS10BP46784 105 aaKnown RBP3.16□□□□□ -1.9
SWI1YPL016W YJL132WP47014 750 aa3.16□□□□□ -1.9
SWI1YPL016W SCW4P53334 386 aaKnown RBP3.16□□□□□ -1.9
SWI1YPL016W ERG13P54839 491 aaKnown RBP3.16□□□□□ -1.9
SWI1YPL016W MIX17Q03667 156 aa3.16□□□□□ -1.9
SWI1YPL016W RPS10AQ08745 105 aaPredicted RBP3.16□□□□□ -1.9
SWI1YPL016W HUT1Q12520 339 aa3.16□□□□□ -1.9
SWI1YPL016W RIM1P32445 135 aaKnown RBP3.15□□□□□ -1.9
SWI1YPL016W SKN1P33336 771 aa3.15□□□□□ -1.9
SWI1YPL016W PAU16P35994 123 aa3.15□□□□□ -1.9
SWI1YPL016W RIB5P38145 238 aa3.15□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms