RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAT1	YOR048C	PRE9	P23638	258 aa	Known RBP	4.55	□□□□□ -1.68
RAT1	YOR048C	LSB5	P25369	354 aa		4.55	□□□□□ -1.68
RAT1	YOR048C	IMP1	P28627	190 aa		4.55	□□□□□ -1.68
RAT1	YOR048C	YKL107W	P34251	309 aa		4.55	□□□□□ -1.68
RAT1	YOR048C	PHS1	P40857	217 aa		4.55	□□□□□ -1.68
RAT1	YOR048C	STP4	Q07351	490 aa		4.55	□□□□□ -1.68
RAT1	YOR048C	YOR376W	Q08900	122 aa		4.55	□□□□□ -1.68
RAT1	YOR048C	FIT3	Q08907	204 aa		4.55	□□□□□ -1.68
RAT1	YOR048C	CMC2	Q3E7A4	109 aa		4.55	□□□□□ -1.68
RAT1	YOR048C	EHD3	P28817	500 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	YGR269W	P40326	108 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	LOC1	P43586	204 aa	Predicted RBP	4.54	□□□□□ -1.68
RAT1	YOR048C	PGU1	P47180	361 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	DSK2	P48510	373 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	YHP1	Q04116	353 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	YLR365W	Q7LIF2	110 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	CDC7	P06243	507 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	ERV1	P27882	189 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	PIC2	P40035	300 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	PAU5	P43575	122 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	PRY1	P47032	299 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	TNA1	P53322	534 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	YNR048W	P53740	393 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	CUP2	P15315	225 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	SAG1	P20840	650 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	YBR292C	P38357	123 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	TRS23	Q03784	219 aa		4.54	□□□□□ -1.68
RAT1	YOR048C	PAA1	Q12447	191 aa	Known RBP	4.54	□□□□□ -1.68
RAT1	YOR048C	MRPS5	P33759	307 aa		4.53	□□□□□ -1.68
RAT1	YOR048C	DER1	P38307	211 aa		4.53	□□□□□ -1.68
RAT1	YOR048C	OST1	P41543	476 aa	Known RBP	4.53	□□□□□ -1.68
RAT1	YOR048C	RPL21A	Q02753	160 aa	Known RBP	4.53	□□□□□ -1.68
RAT1	YOR048C	YPL067C	Q02754	198 aa		4.53	□□□□□ -1.68
RAT1	YOR048C	YPR098C	Q06089	161 aa		4.53	□□□□□ -1.68
RAT1	YOR048C	YTH1	Q06102	208 aa	Predicted RBP	4.53	□□□□□ -1.68
RAT1	YOR048C	RPL21B	Q12672	160 aa	Known RBP	4.53	□□□□□ -1.68
RAT1	YOR048C	RPL9A	P05738	191 aa	Known RBP	4.53	□□□□□ -1.68
RAT1	YOR048C	RPS2	P25443	254 aa	Known RBP	4.53	□□□□□ -1.68
RAT1	YOR048C	GAT2	P40209	560 aa		4.53	□□□□□ -1.68
RAT1	YOR048C	DFG10	P40526	253 aa		4.53	□□□□□ -1.68
RAT1	YOR048C	HNT2	P49775	206 aa		4.53	□□□□□ -1.68
RAT1	YOR048C	RPL9B	P51401	191 aa	Known RBP	4.53	□□□□□ -1.68
RAT1	YOR048C	SKP1	P52286	194 aa		4.53	□□□□□ -1.68
RAT1	YOR048C	CGI121	Q03705	181 aa	Known RBP	4.53	□□□□□ -1.68
RAT1	YOR048C	YMR166C	Q03829	368 aa		4.53	□□□□□ -1.68
RAT1	YOR048C	DPB4	Q04603	196 aa	Known RBP	4.53	□□□□□ -1.68
RAT1	YOR048C	DAP1	Q12091	152 aa		4.53	□□□□□ -1.68
RAT1	YOR048C	PAR32	Q12515	295 aa	Known RBP	4.53	□□□□□ -1.68
RAT1	YOR048C	FMP49	A0A023PZB3	126 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	YHR214C-D	P0CX93	97 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	YPT31	P38555	223 aa	Known RBP	4.52	□□□□□ -1.69
RAT1	YOR048C	FMO1	P38866	432 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	YER134C	P40081	178 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	XBP1	P40489	647 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	YJR015W	P47090	510 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	YGR050C	P53231	118 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	RSM10	Q03201	203 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	YLR118C	Q12354	227 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	AIM24	P47127	394 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	SNP1	Q00916	300 aa	Predicted RBP	4.52	□□□□□ -1.69
RAT1	YOR048C	YDL180W	Q12301	547 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	FLO9	P39712	1322 aa		4.52	□□□□□ -1.69
RAT1	YOR048C	ATP10	P18496	279 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	PEX4	P29340	183 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	TTI2	P47168	421 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	NUP53	Q03790	475 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	PAM18	Q07914	168 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	YCL001W-B	Q96VH2	84 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	PAU19	P0CE85	124 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	PAU21	P0CE86	164 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	PAU22	P0CE87	164 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	PAU3	P25610	124 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	REC104	P33323	182 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	YBL059W	P34224	193 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	CDC40	P40968	455 aa	Predicted RBP	4.51	□□□□□ -1.69
RAT1	YOR048C	ARP3	P47117	449 aa	Known RBP	4.51	□□□□□ -1.69
RAT1	YOR048C	DIG2	Q03373	323 aa	Known RBP	4.51	□□□□□ -1.69
RAT1	YOR048C	YMR210W	Q03649	449 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	REX3	Q12090	404 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	NHP6A	P11632	93 aa	Known RBP	4.51	□□□□□ -1.69
RAT1	YOR048C	SPO7	P18410	259 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	YFL015C	P43578	164 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	POS5	Q06892	414 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	CSM4	Q08955	156 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	POM33	Q12164	279 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	YIL002W-A	Q3E7Z5	69 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	YCR024C-B	Q3E7Z8	88 aa		4.51	□□□□□ -1.69
RAT1	YOR048C	MRPL15	P36523	253 aa		4.5	□□□□□ -1.69
RAT1	YOR048C	PUS4	P48567	403 aa	Known RBP	4.5	□□□□□ -1.69
RAT1	YOR048C	ELA1	P53861	379 aa	Predicted RBP	4.5	□□□□□ -1.69
RAT1	YOR048C	YAP6	Q03935	383 aa		4.5	□□□□□ -1.69
RAT1	YOR048C	YPL264C	Q08980	353 aa		4.5	□□□□□ -1.69
RAT1	YOR048C	YOS1	Q3E834	85 aa		4.5	□□□□□ -1.69
RAT1	YOR048C	PDX1	P16451	410 aa		4.5	□□□□□ -1.69
RAT1	YOR048C	MAK32	P23060	363 aa		4.5	□□□□□ -1.69
RAT1	YOR048C	STS1	P38637	319 aa		4.5	□□□□□ -1.69
RAT1	YOR048C	SMD3	P43321	101 aa	Known RBP	4.5	□□□□□ -1.69
RAT1	YOR048C	YJL028W	P47062	111 aa		4.5	□□□□□ -1.69
RAT1	YOR048C	YIP5	P53108	310 aa		4.5	□□□□□ -1.69
RAT1	YOR048C	PIN3	Q06449	215 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms