RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C DID2P69771 204 aa1.35□□□□□ -2.19
SHE4YOR035C FLO9P39712 1322 aa1.34□□□□□ -2.19
SHE4YOR035C CDC28P00546 298 aaKnown RBP1.34□□□□□ -2.19
SHE4YOR035C HAP2P06774 265 aa1.34□□□□□ -2.19
SHE4YOR035C MRPS28P21771 286 aa1.34□□□□□ -2.19
SHE4YOR035C URA8P38627 578 aaPredicted RBP1.34□□□□□ -2.19
SHE4YOR035C HMF1P40037 129 aaKnown RBP1.34□□□□□ -2.19
SHE4YOR035C TIR3P40552 269 aa1.34□□□□□ -2.19
SHE4YOR035C THP2O13539 261 aaKnown RBP1.34□□□□□ -2.2
SHE4YOR035C YMR31P19955 123 aa1.34□□□□□ -2.2
SHE4YOR035C POP4P38336 279 aa1.34□□□□□ -2.2
SHE4YOR035C ALG13P53178 202 aa1.34□□□□□ -2.2
SHE4YOR035C RPL28P02406 149 aaKnown RBP1.33□□□□□ -2.2
SHE4YOR035C REP2P03872 296 aa1.33□□□□□ -2.2
SHE4YOR035C YLR156WP0CE96 114 aa1.33□□□□□ -2.2
SHE4YOR035C YLR159WP0CE97 114 aa1.33□□□□□ -2.2
SHE4YOR035C YLR161WP0CE98 114 aa1.33□□□□□ -2.2
SHE4YOR035C DBF2P22204 572 aa1.33□□□□□ -2.2
SHE4YOR035C PPA2P28239 310 aa1.33□□□□□ -2.2
SHE4YOR035C FZF1P32805 299 aa1.33□□□□□ -2.2
SHE4YOR035C BMH2P34730 273 aaKnown RBP1.33□□□□□ -2.2
SHE4YOR035C SRY1P36007 326 aa1.33□□□□□ -2.2
SHE4YOR035C TVP38P36164 337 aa1.33□□□□□ -2.2
SHE4YOR035C PRM8P53174 237 aa1.33□□□□□ -2.2
SHE4YOR035C YDR248CQ03786 193 aa1.33□□□□□ -2.2
SHE4YOR035C BRR6P53062 197 aa1.33□□□□□ -2.2
SHE4YOR035C BOL2P53082 120 aa1.33□□□□□ -2.2
SHE4YOR035C TDA8Q6B2U8 126 aa1.33□□□□□ -2.2
SHE4YOR035C RPL27BP0C2H7 136 aaKnown RBP1.32□□□□□ -2.2
SHE4YOR035C YNL217WP40152 326 aa1.32□□□□□ -2.2
SHE4YOR035C YRB2P40517 327 aa1.32□□□□□ -2.2
SHE4YOR035C BXI1P48558 297 aa1.32□□□□□ -2.2
SHE4YOR035C GAS3Q03655 524 aa1.32□□□□□ -2.2
SHE4YOR035C YGL010WP25338 174 aa1.32□□□□□ -2.2
SHE4YOR035C CSI2Q08054 341 aa1.32□□□□□ -2.2
SHE4YOR035C NHP6BP11633 99 aaKnown RBP1.31□□□□□ -2.2
SHE4YOR035C APS1P35181 156 aa1.31□□□□□ -2.2
SHE4YOR035C MRPL28P36527 147 aa1.31□□□□□ -2.2
SHE4YOR035C FAR7P43592 221 aa1.31□□□□□ -2.2
SHE4YOR035C NUP57P48837 541 aa1.31□□□□□ -2.2
SHE4YOR035C YLR162WQ06235 118 aa1.31□□□□□ -2.2
SHE4YOR035C SKG1P36169 355 aa1.3□□□□□ -2.2
SHE4YOR035C YBR220CP38318 560 aa1.3□□□□□ -2.2
SHE4YOR035C SEY1Q99287 776 aa1.3□□□□□ -2.2
SHE4YOR035C YET1P35723 206 aa1.3□□□□□ -2.2
SHE4YOR035C TCD1P38756 429 aa1.3□□□□□ -2.2
SHE4YOR035C SWP1Q02795 286 aa1.3□□□□□ -2.2
SHE4YOR035C YKL183C-AQ3E765 70 aa1.3□□□□□ -2.2
SHE4YOR035C YBR121C-AP0C5L4 52 aa1.29□□□□□ -2.2
SHE4YOR035C RTC3P38804 111 aaPredicted RBP1.29□□□□□ -2.2
SHE4YOR035C GLE2P40066 365 aa1.29□□□□□ -2.2
SHE4YOR035C RPL13BP40212 199 aaKnown RBP1.29□□□□□ -2.2
SHE4YOR035C DOC1P53068 250 aa1.29□□□□□ -2.2
SHE4YOR035C YNR077CP53758 84 aa1.29□□□□□ -2.2
SHE4YOR035C RPL13AQ12690 199 aaPredicted RBP1.29□□□□□ -2.2
SHE4YOR035C TSC3Q3E790 80 aa1.29□□□□□ -2.2
SHE4YOR035C MRPL17P36528 281 aa1.29□□□□□ -2.2
SHE4YOR035C ERG10P41338 398 aaKnown RBP1.29□□□□□ -2.2
SHE4YOR035C OTU1P43558 301 aa1.29□□□□□ -2.2
SHE4YOR035C NUP49Q02199 472 aa1.29□□□□□ -2.2
SHE4YOR035C PDR18P53756 1333 aa1.29□□□□□ -2.2
SHE4YOR035C UMP1P38293 148 aa1.28□□□□□ -2.2
SHE4YOR035C RMD6P39975 231 aa1.28□□□□□ -2.2
SHE4YOR035C ERG28P40030 148 aa1.28□□□□□ -2.2
SHE4YOR035C ADO1P47143 340 aaKnown RBP1.28□□□□□ -2.2
SHE4YOR035C JLP1Q12358 412 aa1.28□□□□□ -2.2
SHE4YOR035C TIM9O74700 87 aa1.28□□□□□ -2.2
SHE4YOR035C RPL2AP0CX45 254 aaKnown RBP1.28□□□□□ -2.2
SHE4YOR035C RPL2BP0CX46 254 aaKnown RBP1.28□□□□□ -2.2
SHE4YOR035C TCA17P32613 152 aa1.28□□□□□ -2.2
SHE4YOR035C MZM1Q03429 123 aaPredicted RBP1.28□□□□□ -2.2
SHE4YOR035C PBN1P25580 416 aa1.27□□□□□ -2.21
SHE4YOR035C CBT1P36038 271 aaPredicted RBP1.27□□□□□ -2.21
SHE4YOR035C GAA1P39012 614 aa1.27□□□□□ -2.21
SHE4YOR035C AST2P39945 430 aaKnown RBP1.27□□□□□ -2.21
SHE4YOR035C YNL194CP40169 301 aa1.27□□□□□ -2.21
SHE4YOR035C YRB1P41920 201 aaKnown RBP1.27□□□□□ -2.21
SHE4YOR035C SAY1P53324 424 aa1.27□□□□□ -2.21
SHE4YOR035C RAD50P12753 1312 aa1.27□□□□□ -2.21
SHE4YOR035C COQ1P18900 473 aa1.27□□□□□ -2.21
SHE4YOR035C SNC2P33328 115 aa1.27□□□□□ -2.21
SHE4YOR035C UTP30P36144 274 aaKnown RBP1.27□□□□□ -2.21
SHE4YOR035C MGA1P53050 456 aa1.27□□□□□ -2.21
SHE4YOR035C MCP1Q12106 302 aa1.27□□□□□ -2.21
SHE4YOR035C BLM10P43583 2143 aa1.27□□□□□ -2.21
SHE4YOR035C STT4P37297 1900 aa1.27□□□□□ -2.21
SHE4YOR035C STE18P18852 110 aa1.26□□□□□ -2.21
SHE4YOR035C SEC17P32602 292 aa1.26□□□□□ -2.21
SHE4YOR035C ANT1Q06497 328 aa1.26□□□□□ -2.21
SHE4YOR035C YPL162CQ12042 273 aa1.26□□□□□ -2.21
SHE4YOR035C QCR8P08525 94 aa1.26□□□□□ -2.21
SHE4YOR035C GPA2P10823 449 aa1.26□□□□□ -2.21
SHE4YOR035C CDC39P25655 2108 aaKnown RBP1.26□□□□□ -2.21
SHE4YOR035C MGM101P32787 269 aaKnown RBP1.26□□□□□ -2.21
SHE4YOR035C GCN3P14741 305 aa1.25□□□□□ -2.21
SHE4YOR035C PTM1P32857 523 aa1.25□□□□□ -2.21
SHE4YOR035C PRP18P33411 251 aaPredicted RBP1.25□□□□□ -2.21
SHE4YOR035C PRX1P34227 261 aaKnown RBP1.25□□□□□ -2.21
SHE4YOR035C UPS2P35200 230 aa1.25□□□□□ -2.21
SHE4YOR035C TMA19P35691 167 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms