RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W YDL242WQ07746 117 aa2.37□□□□□ -2.03
CAF120YNL278W FRE8Q12209 686 aa2.37□□□□□ -2.03
CAF120YNL278W ATP14Q12349 124 aa2.37□□□□□ -2.03
CAF120YNL278W YGL194C-AQ2V2P6 80 aa2.37□□□□□ -2.03
CAF120YNL278W YDR461C-AQ2V2P7 80 aa2.37□□□□□ -2.03
CAF120YNL278W YLR099W-AQ3E798 87 aa2.37□□□□□ -2.03
CAF120YNL278W YLR415CO13578 112 aa2.37□□□□□ -2.03
CAF120YNL278W VAR1P02381 398 aa2.37□□□□□ -2.03
CAF120YNL278W PEP4P07267 405 aaKnown RBP2.37□□□□□ -2.03
CAF120YNL278W RPL31AP0C2H8 113 aaKnown RBP2.37□□□□□ -2.03
CAF120YNL278W ERD1P16151 362 aa2.37□□□□□ -2.03
CAF120YNL278W MSK1P32048 576 aa2.37□□□□□ -2.03
CAF120YNL278W ARO7P32178 256 aa2.37□□□□□ -2.03
CAF120YNL278W PRY2P36110 329 aa2.37□□□□□ -2.03
CAF120YNL278W YKR041WP36134 250 aa2.37□□□□□ -2.03
CAF120YNL278W ANS1P38832 159 aa2.37□□□□□ -2.03
CAF120YNL278W MBB1P39534 108 aa2.37□□□□□ -2.03
CAF120YNL278W YIR035CP40579 254 aa2.37□□□□□ -2.03
CAF120YNL278W NSE4P43124 402 aa2.37□□□□□ -2.03
CAF120YNL278W YJR015WP47090 510 aa2.37□□□□□ -2.03
CAF120YNL278W COQ5P49017 307 aa2.37□□□□□ -2.03
CAF120YNL278W YGR026WP53217 278 aa2.37□□□□□ -2.03
CAF120YNL278W EST3Q03096 181 aa2.37□□□□□ -2.03
CAF120YNL278W YET2Q04210 160 aa2.37□□□□□ -2.03
CAF120YNL278W PRM4Q12498 284 aa2.37□□□□□ -2.03
CAF120YNL278W COX19Q3E731 98 aa2.37□□□□□ -2.03
CAF120YNL278W FMP27Q06179 2628 aa2.37□□□□□ -2.03
CAF120YNL278W MAG1P22134 296 aaKnown RBP2.37□□□□□ -2.03
CAF120YNL278W PCL1P24867 279 aa2.37□□□□□ -2.03
CAF120YNL278W CSE2P33308 149 aa2.37□□□□□ -2.03
CAF120YNL278W YKL075CP36083 450 aa2.37□□□□□ -2.03
CAF120YNL278W MRPS9P38120 278 aa2.37□□□□□ -2.03
CAF120YNL278W TRS20P38334 175 aa2.37□□□□□ -2.03
CAF120YNL278W RPS20P38701 121 aaKnown RBP2.37□□□□□ -2.03
CAF120YNL278W YIL152WP40455 235 aa2.37□□□□□ -2.03
CAF120YNL278W AVT7P40501 490 aa2.37□□□□□ -2.03
CAF120YNL278W APQ12P40532 138 aa2.37□□□□□ -2.03
CAF120YNL278W YIP1P53039 248 aa2.37□□□□□ -2.03
CAF120YNL278W HRI1Q05905 244 aaKnown RBP2.37□□□□□ -2.03
CAF120YNL278W CNL1Q06333 122 aa2.37□□□□□ -2.03
CAF120YNL278W TDA6Q06466 467 aa2.37□□□□□ -2.03
CAF120YNL278W BOL1Q3E793 110 aa2.37□□□□□ -2.03
CAF120YNL278W YLR365WQ7LIF2 110 aa2.37□□□□□ -2.03
CAF120YNL278W YBR298C-AQ8TGK4 73 aa2.37□□□□□ -2.03
CAF120YNL278W YCL042WP25572 119 aa2.36□□□□□ -2.03
CAF120YNL278W CNE1P27825 502 aa2.36□□□□□ -2.03
CAF120YNL278W YKL187CP34231 750 aa2.36□□□□□ -2.03
CAF120YNL278W SHE2P36068 246 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
CAF120YNL278W FMP46P36141 133 aaKnown RBP2.36□□□□□ -2.03
CAF120YNL278W DOG1P38774 246 aa2.36□□□□□ -2.03
CAF120YNL278W YEA6P39953 335 aa2.36□□□□□ -2.03
CAF120YNL278W GLE2P40066 365 aa2.36□□□□□ -2.03
CAF120YNL278W YLR152CP54072 576 aa2.36□□□□□ -2.03
CAF120YNL278W ELC1Q03071 99 aa2.36□□□□□ -2.03
CAF120YNL278W MCH1Q07376 486 aa2.36□□□□□ -2.03
CAF120YNL278W YOL073CQ08232 322 aa2.36□□□□□ -2.03
CAF120YNL278W ATG41Q12048 136 aa2.36□□□□□ -2.03
CAF120YNL278W YCR075W-AQ3E830 75 aa2.36□□□□□ -2.03
CAF120YNL278W YER039C-AP0CD97 72 aa2.36□□□□□ -2.03
CAF120YNL278W SNC1P31109 117 aa2.36□□□□□ -2.03
CAF120YNL278W NTF2P33331 125 aaKnown RBP2.36□□□□□ -2.03
CAF120YNL278W SKN1P33336 771 aa2.36□□□□□ -2.03
CAF120YNL278W MSN2P33748 704 aa2.36□□□□□ -2.03
CAF120YNL278W CUE1P38428 203 aa2.36□□□□□ -2.03
CAF120YNL278W HAC1P41546 238 aa2.36□□□□□ -2.03
CAF120YNL278W ASI3P53983 676 aa2.36□□□□□ -2.03
CAF120YNL278W DAD3P69850 94 aa2.36□□□□□ -2.03
CAF120YNL278W SPC3Q12133 184 aa2.36□□□□□ -2.03
CAF120YNL278W YDL177CQ12257 170 aa2.36□□□□□ -2.03
CAF120YNL278W UTP23Q12339 254 aaKnown RBP2.36□□□□□ -2.03
CAF120YNL278W REP2P03872 296 aa2.35□□□□□ -2.03
CAF120YNL278W ADK1P07170 222 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W YFR010W-AP0C5N0 62 aa2.35□□□□□ -2.03
CAF120YNL278W RPS8AP0CX39 200 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W RPS8BP0CX40 200 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W GRX2P17695 143 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W TIR2P33890 251 aa2.35□□□□□ -2.03
CAF120YNL278W YGP1P38616 354 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W YAR068WP39564 161 aa2.35□□□□□ -2.03
CAF120YNL278W SNU13P39990 126 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W GAT2P40209 560 aa2.35□□□□□ -2.03
CAF120YNL278W SMD3P43321 101 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W UBP8P50102 471 aa2.35□□□□□ -2.03
CAF120YNL278W SDT1P53078 280 aa2.35□□□□□ -2.03
CAF120YNL278W SAY1P53324 424 aa2.35□□□□□ -2.03
CAF120YNL278W NUP53Q03790 475 aa2.35□□□□□ -2.03
CAF120YNL278W YMR320WQ04897 101 aa2.35□□□□□ -2.03
CAF120YNL278W YPR174CQ06616 221 aaPredicted RBP2.35□□□□□ -2.03
CAF120YNL278W FEX2Q08991 375 aa2.35□□□□□ -2.03
CAF120YNL278W YPR014CQ6B0W2 109 aa2.35□□□□□ -2.03
CAF120YNL278W TAD3Q9URQ3 322 aa2.35□□□□□ -2.03
CAF120YNL278W SEN1Q00416 2231 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W RPL20AP0CX23 172 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W RPL20BP0CX24 172 aaPredicted RBP2.35□□□□□ -2.03
CAF120YNL278W RPL12AP0CX53 165 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W RPL12BP0CX54 165 aa2.35□□□□□ -2.03
CAF120YNL278W RPS18AP0CX55 146 aaKnown RBP2.35□□□□□ -2.03
CAF120YNL278W RPS18BP0CX56 146 aaPredicted RBP2.35□□□□□ -2.03
CAF120YNL278W YFL068WP0CX99 160 aa2.35□□□□□ -2.03
CAF120YNL278W YLL066W-AP0CY00 160 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms