RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	MRPS8	Q03799	155 aa		1.15	□□□□□ -2.23
PKR1	YMR123W	CSN9	Q03981	162 aa		1.15	□□□□□ -2.23
PKR1	YMR123W	HPT1	Q04178	221 aa	Known RBP	1.15	□□□□□ -2.23
PKR1	YMR123W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	1.15	□□□□□ -2.23	not detected
PKR1	YMR123W	YOR032W-A	Q8TGS1	66 aa		1.15	□□□□□ -2.23
PKR1	YMR123W	Q0297	Q9ZZV8	51 aa		1.15	□□□□□ -2.23
PKR1	YMR123W	GPA2	P10823	449 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	TRX3	P25372	127 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	RAD51	P25454	400 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	MSN4	P33749	630 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	FZO1	P38297	855 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	AST2	P39945	430 aa	Known RBP	1.14	□□□□□ -2.23
PKR1	YMR123W	YER034W	P40022	185 aa	Known RBP	1.14	□□□□□ -2.23
PKR1	YMR123W	SOK1	P40317	901 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	BMT5	P40493	336 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	CAT5	P41735	233 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	PRM10	P42946	383 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	ALB1	P47019	175 aa	Predicted RBP	1.14	□□□□□ -2.23
PKR1	YMR123W	AIF1	P52923	378 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	EFM5	P53200	248 aa	Known RBP	1.14	□□□□□ -2.23
PKR1	YMR123W	GTR2	P53290	341 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	MPA43	P53583	542 aa	Predicted RBP	1.14	□□□□□ -2.23
PKR1	YMR123W	YNL140C	P53910	189 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	MET31	Q03081	177 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	FAR8	Q05040	523 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	NIP7	Q08962	181 aa	Known RBP	1.14	□□□□□ -2.23
PKR1	YMR123W	RUD3	Q12234	484 aa	Known RBP	1.14	□□□□□ -2.23
PKR1	YMR123W	SNU23	Q12368	194 aa	Predicted RBP	1.14	□□□□□ -2.23
PKR1	YMR123W	YMR030W-A	Q3E760	96 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	YCL012C	Q8J0M4	134 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	STT4	P37297	1900 aa		1.14	□□□□□ -2.23
PKR1	YMR123W	CCW14	O13547	238 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	RHO1	P06780	209 aa	Known RBP	1.13	□□□□□ -2.23
PKR1	YMR123W	YOL162W	P0CF19	215 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	YHR214C-D	P0CX93	97 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	1.13	□□□□□ -2.23	not detected
PKR1	YMR123W	CBF1	P17106	351 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	MDH2	P22133	377 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	YCR016W	P25617	290 aa	Known RBP	1.13	□□□□□ -2.23
PKR1	YMR123W	YCR090C	P25654	182 aa	Known RBP	1.13	□□□□□ -2.23
PKR1	YMR123W	HSP150	P32478	413 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	NTF2	P33331	125 aa	Known RBP	1.13	□□□□□ -2.23
PKR1	YMR123W	SRY1	P36007	326 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	VPS21	P36017	210 aa	Known RBP	1.13	□□□□□ -2.23
PKR1	YMR123W	PRS3	P38689	320 aa	Known RBP	1.13	□□□□□ -2.23
PKR1	YMR123W	PEX17	P40155	199 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	YMR144W	P40214	342 aa	Known RBP	1.13	□□□□□ -2.23
PKR1	YMR123W	YIL001W	P40560	513 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	FMP32	P43557	207 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	APS3	P47064	194 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	YLR460C	P54007	376 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	ATO3	Q12359	275 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	DCN1	Q12395	269 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	PSF1	Q12488	208 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	UBR1	P19812	1950 aa		1.13	□□□□□ -2.23
PKR1	YMR123W	CDC36	P06100	191 aa	Predicted RBP	1.12	□□□□□ -2.23
PKR1	YMR123W	SPT3	P06844	337 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	NMT1	P14743	455 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	GRX2	P17695	143 aa	Known RBP	1.12	□□□□□ -2.23
PKR1	YMR123W	SEC17	P32602	292 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	SSO1	P32867	290 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	RPS1A	P33442	255 aa	Known RBP	1.12	□□□□□ -2.23
PKR1	YMR123W	YCR087C-A	P37263	153 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	ETR1	P38071	380 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	ECM33	P38248	429 aa	Known RBP	1.12	□□□□□ -2.23
PKR1	YMR123W	YHR180W	P38868	163 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	AIM2	P39721	246 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	VTC1	P40046	129 aa	RIP-Chip data	1.12	□□□□□ -2.23	not detected
PKR1	YMR123W	FMC1	P40491	155 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	YFL051C	P43552	160 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	ERG25	P53045	309 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	RPL22B	P56628	122 aa	Known RBP	1.12	□□□□□ -2.23
PKR1	YMR123W	CYT2	Q00873	224 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	YET3	Q07451	203 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	GET4	Q12125	312 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	MED4	Q12343	284 aa		1.12	□□□□□ -2.23
PKR1	YMR123W	ARG80	P07249	177 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	CDC10	P25342	322 aa	Known RBP	1.11	□□□□□ -2.23
PKR1	YMR123W	BUB2	P26448	306 aa	Predicted RBP	1.11	□□□□□ -2.23
PKR1	YMR123W	YBR220C	P38318	560 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	MIC12	P38341	106 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	YHL037C	P38733	133 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	YHR022C	P38763	256 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	RPF1	P38805	295 aa	Known RBP	1.11	□□□□□ -2.23
PKR1	YMR123W	DSE2	P38844	325 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	PRE6	P40303	254 aa	Known RBP	1.11	□□□□□ -2.23
PKR1	YMR123W	RPS12	P48589	143 aa	Known RBP	1.11	□□□□□ -2.23
PKR1	YMR123W	YGR219W	P53307	113 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	ERV29	P53337	310 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	MRPL50	P53724	139 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	SWP1	Q02795	286 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	NCE101	Q02820	53 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	YDR249C	Q03787	373 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	SML1	Q04964	104 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	YLR283W	Q05867	314 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	ATG39	Q06159	398 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	RAF1	Q06891	181 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	YLR036C	Q07986	203 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	YPL257W	Q08974	193 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	YLR053C	Q12026	108 aa		1.11	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 71 ms