RNA–Protein interactions for RNA: YML031W

NDC1, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeast

Gene NDC1, Length 1,968 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC1	YML031W	HXT14	P42833	540 aa		4.27	□□□□□ -1.73
NDC1	YML031W	BNA1	P47096	177 aa		4.27	□□□□□ -1.73
NDC1	YML031W	YIF1	P53845	314 aa	Known RBP	4.27	□□□□□ -1.73
NDC1	YML031W	MEH1	Q02205	184 aa		4.27	□□□□□ -1.73
NDC1	YML031W	ADD37	Q03233	198 aa		4.27	□□□□□ -1.73
NDC1	YML031W	ERP1	Q05359	219 aa	Known RBP	4.27	□□□□□ -1.73
NDC1	YML031W	RTT103	Q05543	409 aa		4.27	□□□□□ -1.73
NDC1	YML031W	ARR2	Q06597	130 aa		4.27	□□□□□ -1.73
NDC1	YML031W	YPR071W	Q12346	211 aa		4.27	□□□□□ -1.73
NDC1	YML031W	SEC59	P20048	519 aa		4.26	□□□□□ -1.73
NDC1	YML031W	SUA7	P29055	345 aa	Predicted RBP	4.26	□□□□□ -1.73
NDC1	YML031W	AFG1	P32317	509 aa		4.26	□□□□□ -1.73
NDC1	YML031W	ERG3	P32353	365 aa		4.26	□□□□□ -1.73
NDC1	YML031W	MRPL4	P36517	319 aa		4.26	□□□□□ -1.73
NDC1	YML031W	RIB5	P38145	238 aa		4.26	□□□□□ -1.73
NDC1	YML031W	YEA6	P39953	335 aa		4.26	□□□□□ -1.73
NDC1	YML031W	SPC25	P40014	221 aa		4.26	□□□□□ -1.73
NDC1	YML031W	GET2	P40056	285 aa		4.26	□□□□□ -1.73
NDC1	YML031W	AGE2	P40529	298 aa		4.26	□□□□□ -1.73
NDC1	YML031W	AVT4	P50944	713 aa		4.26	□□□□□ -1.73
NDC1	YML031W	ERV14	P53173	138 aa		4.26	□□□□□ -1.73
NDC1	YML031W	ALG9	P53868	555 aa	Known RBP	4.26	□□□□□ -1.73
NDC1	YML031W	OCA2	P53949	197 aa		4.26	□□□□□ -1.73
NDC1	YML031W	TMA23	Q03525	211 aa		4.26	□□□□□ -1.73
NDC1	YML031W	YDR415C	Q04033	374 aa	Predicted RBP	4.26	□□□□□ -1.73
NDC1	YML031W	SEN15	Q04675	128 aa		4.26	□□□□□ -1.73
NDC1	YML031W	DCN1	Q12395	269 aa		4.26	□□□□□ -1.73
NDC1	YML031W	ILV5	P06168	395 aa	Known RBP	4.25	□□□□□ -1.73
NDC1	YML031W	SPS4	P09937	338 aa		4.25	□□□□□ -1.73
NDC1	YML031W	MRS4	P23500	304 aa		4.25	□□□□□ -1.73
NDC1	YML031W	SCM4	P32564	187 aa		4.25	□□□□□ -1.73
NDC1	YML031W	YCR041W	P37265	110 aa		4.25	□□□□□ -1.73
NDC1	YML031W	FIG1	P38224	298 aa		4.25	□□□□□ -1.73
NDC1	YML031W	UMP1	P38293	148 aa		4.25	□□□□□ -1.73
NDC1	YML031W	PAU15	P40585	124 aa		4.25	□□□□□ -1.73
NDC1	YML031W	PIR5	P46999	287 aa		4.25	□□□□□ -1.73
NDC1	YML031W	YGL185C	P53100	379 aa		4.25	□□□□□ -1.73
NDC1	YML031W	YGL114W	P53134	725 aa		4.25	□□□□□ -1.73
NDC1	YML031W	MRPS17	Q03246	237 aa	Predicted RBP	4.25	□□□□□ -1.73
NDC1	YML031W	YCT1	Q12235	531 aa		4.25	□□□□□ -1.73
NDC1	YML031W	VAM3	Q12241	283 aa		4.25	□□□□□ -1.73
NDC1	YML031W	QCR2	P07257	368 aa		4.25	□□□□□ -1.73
NDC1	YML031W	RFA1	P22336	621 aa	Known RBP	4.25	□□□□□ -1.73
NDC1	YML031W	EDS1	P38073	919 aa		4.25	□□□□□ -1.73
NDC1	YML031W	ERJ5	P43613	295 aa	Predicted RBP	4.25	□□□□□ -1.73
NDC1	YML031W	YMR166C	Q03829	368 aa		4.25	□□□□□ -1.73
NDC1	YML031W	AIM45	Q12480	344 aa	Known RBP	4.25	□□□□□ -1.73
NDC1	YML031W	LAC1	P28496	418 aa		4.24	□□□□□ -1.73
NDC1	YML031W	ALG14	P38242	237 aa		4.24	□□□□□ -1.73
NDC1	YML031W	YPT31	P38555	223 aa	Known RBP	4.24	□□□□□ -1.73
NDC1	YML031W	YND1	P40009	630 aa		4.24	□□□□□ -1.73
NDC1	YML031W	PUS4	P48567	403 aa	Known RBP	4.24	□□□□□ -1.73
NDC1	YML031W	BNS1	P50084	137 aa		4.24	□□□□□ -1.73
NDC1	YML031W	VPS28	Q02767	242 aa		4.24	□□□□□ -1.73
NDC1	YML031W	ASM4	Q05166	528 aa		4.24	□□□□□ -1.73
NDC1	YML031W	YOR015W	Q12169	119 aa		4.24	□□□□□ -1.73
NDC1	YML031W	GDH1	P07262	454 aa	Known RBP	4.23	□□□□□ -1.73
NDC1	YML031W	MIR1	P23641	311 aa	Known RBP	4.23	□□□□□ -1.73
NDC1	YML031W	VMA3	P25515	160 aa		4.23	□□□□□ -1.73
NDC1	YML031W	YCR101C	P25607	182 aa		4.23	□□□□□ -1.73
NDC1	YML031W	POP5	P28005	173 aa		4.23	□□□□□ -1.73
NDC1	YML031W	MRPL28	P36527	147 aa		4.23	□□□□□ -1.73
NDC1	YML031W	YEA4	P40004	342 aa		4.23	□□□□□ -1.73
NDC1	YML031W	RPL13B	P40212	199 aa	Known RBP	4.23	□□□□□ -1.73
NDC1	YML031W	YAP1802	P53309	568 aa		4.23	□□□□□ -1.73
NDC1	YML031W	THI74	Q04083	370 aa		4.23	□□□□□ -1.73
NDC1	YML031W	ECM18	Q04623	453 aa		4.23	□□□□□ -1.73
NDC1	YML031W	HOF1	Q05080	669 aa		4.23	□□□□□ -1.73
NDC1	YML031W	LIP2	Q06005	328 aa		4.23	□□□□□ -1.73
NDC1	YML031W	TMA10	Q06177	86 aa		4.23	□□□□□ -1.73
NDC1	YML031W	MRX9	Q07349	420 aa	Known RBP	4.23	□□□□□ -1.73
NDC1	YML031W	MED7	Q08278	222 aa		4.23	□□□□□ -1.73
NDC1	YML031W	YLR118C	Q12354	227 aa		4.23	□□□□□ -1.73
NDC1	YML031W	RPL13A	Q12690	199 aa	Predicted RBP	4.23	□□□□□ -1.73
NDC1	YML031W	ATP10	P18496	279 aa		4.23	□□□□□ -1.73
NDC1	YML031W	OLE1	P21147	510 aa	Known RBP	4.23	□□□□□ -1.73
NDC1	YML031W	AIM24	P47127	394 aa		4.23	□□□□□ -1.73
NDC1	YML031W	YGR045C	P53229	120 aa		4.23	□□□□□ -1.73
NDC1	YML031W	MHR1	Q06630	226 aa		4.23	□□□□□ -1.73
NDC1	YML031W	CTR3	Q06686	241 aa		4.23	□□□□□ -1.73
NDC1	YML031W	TY1A-H	P0C2I4	478 aa	Known RBP	4.22	□□□□□ -1.73
NDC1	YML031W	RFA3	P26755	122 aa	Known RBP	4.22	□□□□□ -1.73
NDC1	YML031W	IMP1	P28627	190 aa		4.22	□□□□□ -1.73
NDC1	YML031W	SOR1	P35497	357 aa	Known RBP	4.22	□□□□□ -1.73
NDC1	YML031W	SOL3	P38858	249 aa		4.22	□□□□□ -1.73
NDC1	YML031W	MGA1	P53050	456 aa		4.22	□□□□□ -1.73
NDC1	YML031W	YGL262W	P53054	175 aa		4.22	□□□□□ -1.73
NDC1	YML031W	COX18	P53239	316 aa		4.22	□□□□□ -1.73
NDC1	YML031W	SOR2	Q07786	357 aa		4.22	□□□□□ -1.73
NDC1	YML031W	UBA3	Q99344	299 aa		4.22	□□□□□ -1.73
NDC1	YML031W	CDC28	P00546	298 aa	Known RBP	4.22	□□□□□ -1.73
NDC1	YML031W	RPL25	P04456	142 aa	Known RBP	4.22	□□□□□ -1.73
NDC1	YML031W	MRPL44	P19956	98 aa		4.22	□□□□□ -1.73
NDC1	YML031W	ELO2	P25358	347 aa		4.22	□□□□□ -1.73
NDC1	YML031W	ADH5	P38113	351 aa	Known RBP	4.22	□□□□□ -1.73
NDC1	YML031W	FLO5	P38894	1075 aa		4.22	□□□□□ -1.73
NDC1	YML031W	YJR011C	P47086	261 aa	Predicted RBP	4.22	□□□□□ -1.73
NDC1	YML031W	CYT2	Q00873	224 aa		4.22	□□□□□ -1.73
NDC1	YML031W	CUE4	Q04201	117 aa	Predicted RBP	4.22	□□□□□ -1.73
NDC1	YML031W	YMR082C	Q04276	118 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms