RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	YIF1	P53845	314 aa	Known RBP	4.39	□□□□□ -1.71
SEC39	YLR440C	LOA1	Q06508	300 aa		4.39	□□□□□ -1.71
SEC39	YLR440C	STP4	Q07351	490 aa		4.39	□□□□□ -1.71
SEC39	YLR440C	YPQ1	Q12010	308 aa		4.39	□□□□□ -1.71
SEC39	YLR440C	VAC17	P25591	423 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	NUD1	P32336	851 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	GEP4	P38812	185 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	ATG18	P43601	500 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	SFT1	P43682	97 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	TIS11	P47977	285 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	NMA2	P53204	395 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	CAB4	P53332	305 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	CDC14	Q00684	551 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	CYT2	Q00873	224 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	STP3	Q05937	343 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	PBP4	Q07362	185 aa	Known RBP	4.38	□□□□□ -1.71
SEC39	YLR440C	YLR049C	Q12110	428 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	YPL245W	Q12179	454 aa	Known RBP	4.38	□□□□□ -1.71
SEC39	YLR440C	YOS1	Q3E834	85 aa		4.38	□□□□□ -1.71
SEC39	YLR440C	AAC1	P04710	309 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	HMRA1	P0CY11	126 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	COX10	P21592	462 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	MSN2	P33748	704 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	TMA19	P35691	167 aa	Known RBP	4.37	□□□□□ -1.71
SEC39	YLR440C	TEM1	P38987	245 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	YPL073C	P40323	161 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	YFR045W	P43617	309 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	PRY1	P47032	299 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	CPD1	P53314	239 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	SNX3	Q08826	162 aa	Known RBP	4.37	□□□□□ -1.71
SEC39	YLR440C	ACM1	Q08981	209 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	YPR145C-A	Q2V2P0	78 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	ILV1	P00927	576 aa	Known RBP	4.37	□□□□□ -1.71
SEC39	YLR440C	SIR2	P06700	562 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	NOP1	P15646	327 aa	Known RBP	4.37	□□□□□ -1.71
SEC39	YLR440C	MXR2	P25566	168 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	COX13	P32799	129 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	YBR144C	P34215	104 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	TRS20	P38334	175 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	AVT7	P40501	490 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	PFS2	P42841	465 aa	Known RBP	4.37	□□□□□ -1.71
SEC39	YLR440C	PAM16	P42949	149 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	MSY1	P48527	492 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	RCR2	Q03446	210 aa	Known RBP	4.37	□□□□□ -1.71
SEC39	YLR440C	NAT5	Q08689	176 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	YGK3	Q12222	375 aa	Predicted RBP	4.37	□□□□□ -1.71
SEC39	YLR440C	YLR126C	Q12288	251 aa		4.37	□□□□□ -1.71
SEC39	YLR440C	MYO1	P08964	1928 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	TY1A-H	P0C2I4	478 aa	Known RBP	4.36	□□□□□ -1.71
SEC39	YLR440C	SNF4	P12904	322 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	YKR070W	P36151	352 aa	Known RBP	4.36	□□□□□ -1.71
SEC39	YLR440C	SDH4	P37298	181 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	RPB11	P38902	120 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	AVT2	P39981	480 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	CAT5	P41735	233 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	TTI2	P47168	421 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	VPS71	Q03433	280 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	FCF1	Q05498	189 aa	Predicted RBP	4.36	□□□□□ -1.71
SEC39	YLR440C	PIN3	Q06449	215 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	ASA1	Q06822	443 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	PAU23	Q07987	124 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	RRS1	Q08746	203 aa	Known RBP	4.36	□□□□□ -1.71
SEC39	YLR440C	TIR4	Q12218	487 aa	Predicted RBP	4.36	□□□□□ -1.71
SEC39	YLR440C	PAU17	Q12370	124 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	MED11	Q99278	115 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	MOT1	P32333	1867 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	COX5A	P00424	153 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	DAT1	P13483	248 aa	Known RBP	4.36	□□□□□ -1.71
SEC39	YLR440C	MKK1	P32490	508 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	YBR032W	P38223	100 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	YNL320W	P42840	284 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	YFL065C	P43539	102 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	RRT5	P43607	289 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	TEX1	P53851	422 aa	Known RBP	4.36	□□□□□ -1.71
SEC39	YLR440C	MRPS16	Q02608	121 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	YMR317W	Q04893	1140 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	YPR203W	Q08994	102 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	VMA9	Q3E7B6	73 aa		4.36	□□□□□ -1.71
SEC39	YLR440C	MRPL20	P22354	195 aa	Predicted RBP	4.35	□□□□□ -1.71
SEC39	YLR440C	PUP3	P25451	205 aa	Known RBP	4.35	□□□□□ -1.71
SEC39	YLR440C	GAR1	P28007	205 aa	Known RBP	4.35	□□□□□ -1.71
SEC39	YLR440C	QRI5	P32344	111 aa		4.35	□□□□□ -1.71
SEC39	YLR440C	FMP46	P36141	133 aa	Known RBP	4.35	□□□□□ -1.71
SEC39	YLR440C	GPX2	P38143	162 aa		4.35	□□□□□ -1.71
SEC39	YLR440C	SMM1	P53720	384 aa	Known RBP	4.35	□□□□□ -1.71
SEC39	YLR440C	DUG3	P53871	357 aa		4.35	□□□□□ -1.71
SEC39	YLR440C	LSM3	P57743	89 aa	Known RBP	4.35	□□□□□ -1.71
SEC39	YLR440C	YMR166C	Q03829	368 aa		4.35	□□□□□ -1.71
SEC39	YLR440C	RIP1	P08067	215 aa		4.34	□□□□□ -1.71
SEC39	YLR440C	ATS1	P31386	333 aa		4.34	□□□□□ -1.71
SEC39	YLR440C	ACB1	P31787	87 aa		4.34	□□□□□ -1.71
SEC39	YLR440C	UTR5	P32630	166 aa		4.34	□□□□□ -1.71
SEC39	YLR440C	ECM15	P35195	104 aa		4.34	□□□□□ -1.71
SEC39	YLR440C	INM1	P38710	295 aa		4.34	□□□□□ -1.71
SEC39	YLR440C	SMD3	P43321	101 aa	Known RBP	4.34	□□□□□ -1.71
SEC39	YLR440C	YFR054C	P43622	192 aa		4.34	□□□□□ -1.71
SEC39	YLR440C	PUS2	P53167	370 aa		4.34	□□□□□ -1.71
SEC39	YLR440C	GEP7	P53171	287 aa		4.34	□□□□□ -1.71
SEC39	YLR440C	ERG26	P53199	349 aa	Known RBP	4.34	□□□□□ -1.71
SEC39	YLR440C	KEI1	Q06346	221 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms