RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C SFH5P47008 294 aa1.61□□□□□ -2.15
IRC20YLR247C NUP57P48837 541 aa1.61□□□□□ -2.15
IRC20YLR247C BUD17P53727 317 aa1.61□□□□□ -2.15
IRC20YLR247C TEX1P53851 422 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C LSM3P57743 89 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C COF1Q03048 143 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C RAV2Q03956 351 aa1.61□□□□□ -2.15
IRC20YLR247C ASM4Q05166 528 aa1.61□□□□□ -2.15
IRC20YLR247C YDL218WQ07629 317 aa1.61□□□□□ -2.15
IRC20YLR247C GEP3Q08622 556 aa1.61□□□□□ -2.15
IRC20YLR247C ALG6Q12001 544 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C YGL041C-BQ3E750 60 aa1.61□□□□□ -2.15
IRC20YLR247C YFL041W-AQ3E817 63 aa1.61□□□□□ -2.15
IRC20YLR247C YLR149CQ99296 730 aa1.61□□□□□ -2.15
IRC20YLR247C UBI4P0CG63 381 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C RPS16AP0CX51 143 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C RPS16BP0CX52 143 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C MSI1P13712 422 aa1.61□□□□□ -2.15
IRC20YLR247C ERS1P17261 260 aa1.61□□□□□ -2.15
IRC20YLR247C BUB2P26448 306 aaPredicted RBP1.61□□□□□ -2.15
IRC20YLR247C TIP1P27654 210 aaPredicted RBP1.61□□□□□ -2.15
IRC20YLR247C MSK1P32048 576 aa1.61□□□□□ -2.15
IRC20YLR247C IES6P32617 166 aa1.61□□□□□ -2.15
IRC20YLR247C TIR2P33890 251 aa1.61□□□□□ -2.15
IRC20YLR247C SRL3P36167 246 aa1.61□□□□□ -2.15
IRC20YLR247C YAR068WP39564 161 aa1.61□□□□□ -2.15
IRC20YLR247C FCY21P40039 528 aa1.61□□□□□ -2.15
IRC20YLR247C YMR007WQ03675 126 aa1.61□□□□□ -2.15
IRC20YLR247C FIT1Q04433 528 aa1.61□□□□□ -2.15
IRC20YLR247C IRC21Q04772 201 aa1.61□□□□□ -2.15
IRC20YLR247C YLR040CQ07988 224 aa1.61□□□□□ -2.15
IRC20YLR247C YOR378WQ08902 515 aa1.61□□□□□ -2.15
IRC20YLR247C YOR289WQ12012 251 aaPredicted RBP1.61□□□□□ -2.15
IRC20YLR247C FRE8Q12209 686 aa1.61□□□□□ -2.15
IRC20YLR247C RLM1Q12224 676 aa1.61□□□□□ -2.15
IRC20YLR247C HUT1Q12520 339 aa1.61□□□□□ -2.15
IRC20YLR247C YLR146W-AQ2V2P1 62 aa1.61□□□□□ -2.15
IRC20YLR247C MIC10Q96VH5 97 aa1.61□□□□□ -2.15
IRC20YLR247C YER145C-AA0A023PYF4 145 aa1.6□□□□□ -2.15
IRC20YLR247C ALG7P07286 448 aa1.6□□□□□ -2.15
IRC20YLR247C YHR214C-DP0CX93 97 aa1.6□□□□□ -2.15
IRC20YLR247C COX10P21592 462 aa1.6□□□□□ -2.15
IRC20YLR247C MRPL20P22354 195 aaPredicted RBP1.6□□□□□ -2.15
IRC20YLR247C IMG1P25626 169 aa1.6□□□□□ -2.15
IRC20YLR247C FMT1P32785 401 aa1.6□□□□□ -2.15
IRC20YLR247C YBR292CP38357 123 aa1.6□□□□□ -2.15
IRC20YLR247C YEL020CP39994 560 aa1.6□□□□□ -2.15
IRC20YLR247C DAN1P47178 298 aa1.6□□□□□ -2.15
IRC20YLR247C YDR366CP87287 132 aa1.6□□□□□ -2.15
IRC20YLR247C CAC2Q04199 468 aa1.6□□□□□ -2.15
IRC20YLR247C YMR310CQ04867 317 aaPredicted RBP1.6□□□□□ -2.15
IRC20YLR247C HPA2Q06592 156 aa1.6□□□□□ -2.15
IRC20YLR247C YDL121CQ07541 149 aa1.6□□□□□ -2.15
IRC20YLR247C FCY22Q12119 530 aa1.6□□□□□ -2.15
IRC20YLR247C TPT1Q12272 230 aaKnown RBP1.6□□□□□ -2.15
IRC20YLR247C MCT1Q12283 360 aa1.6□□□□□ -2.15
IRC20YLR247C ICT1Q12385 394 aa1.6□□□□□ -2.15
IRC20YLR247C YMR105W-AQ8TGS8 64 aa1.6□□□□□ -2.15
IRC20YLR247C DFG16Q99234 619 aa1.6□□□□□ -2.15
IRC20YLR247C COX5AP00424 153 aa1.6□□□□□ -2.15
IRC20YLR247C NHP6BP11633 99 aaKnown RBP1.6□□□□□ -2.15
IRC20YLR247C TRX1P22217 103 aaKnown RBP1.6□□□□□ -2.15
IRC20YLR247C TRX3P25372 127 aa1.6□□□□□ -2.15
IRC20YLR247C SFC1P33303 322 aa1.6□□□□□ -2.15
IRC20YLR247C PIG2P40187 538 aa1.6□□□□□ -2.15
IRC20YLR247C AVT7P40501 490 aa1.6□□□□□ -2.15
IRC20YLR247C FIP1P45976 327 aa1.6□□□□□ -2.15
IRC20YLR247C ATG27P46989 271 aa1.6□□□□□ -2.15
IRC20YLR247C YJR111CP47148 283 aaKnown RBP1.6□□□□□ -2.15
IRC20YLR247C GPG1P53130 126 aa1.6□□□□□ -2.15
IRC20YLR247C EMI1Q04406 187 aa1.6□□□□□ -2.15
IRC20YLR247C FCF1Q05498 189 aaPredicted RBP1.6□□□□□ -2.15
IRC20YLR247C SNX3Q08826 162 aaKnown RBP1.6□□□□□ -2.15
IRC20YLR247C YPL264CQ08980 353 aa1.6□□□□□ -2.15
IRC20YLR247C YDR262WQ12331 272 aa1.6□□□□□ -2.15
IRC20YLR247C YPR071WQ12346 211 aa1.6□□□□□ -2.15
IRC20YLR247C PAR32Q12515 295 aaKnown RBP1.6□□□□□ -2.15
IRC20YLR247C MRS3P10566 314 aa1.6□□□□□ -2.15
IRC20YLR247C PHO80P20052 293 aa1.6□□□□□ -2.15
IRC20YLR247C PTC1P35182 281 aa1.6□□□□□ -2.15
IRC20YLR247C SWD2P36104 329 aaPredicted RBP1.6□□□□□ -2.15
IRC20YLR247C ETR1P38071 380 aa1.6□□□□□ -2.15
IRC20YLR247C AVT5P38176 459 aa1.6□□□□□ -2.15
IRC20YLR247C YBR096WP38256 230 aa1.6□□□□□ -2.15
IRC20YLR247C PRS2P38620 318 aaKnown RBP1.6□□□□□ -2.15
IRC20YLR247C YJR120WP47157 116 aa1.6□□□□□ -2.15
IRC20YLR247C RCF2P53721 224 aa1.6□□□□□ -2.15
IRC20YLR247C YNL234WP53857 426 aa1.6□□□□□ -2.15
IRC20YLR247C YNL143CP53908 130 aa1.6□□□□□ -2.15
IRC20YLR247C HXT11P54862 567 aa1.6□□□□□ -2.15
IRC20YLR247C PFA5Q03289 374 aa1.6□□□□□ -2.15
IRC20YLR247C SMA2Q04658 369 aa1.6□□□□□ -2.15
IRC20YLR247C CRR1Q05790 422 aa1.6□□□□□ -2.15
IRC20YLR247C COX17Q12287 69 aa1.6□□□□□ -2.15
IRC20YLR247C ATG5Q12380 294 aa1.6□□□□□ -2.15
IRC20YLR247C GAL1P04385 528 aa1.6□□□□□ -2.15
IRC20YLR247C SIR2P06700 562 aa1.6□□□□□ -2.15
IRC20YLR247C MSS18P08593 268 aa1.6□□□□□ -2.15
IRC20YLR247C GCY1P14065 312 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
IRC20YLR247C RPB10P22139 70 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms