RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W MYO1P08964 1928 aa3.22□□□□□ -1.89
SIR1YKR101W RPL25P04456 142 aaKnown RBP3.22□□□□□ -1.89
SIR1YKR101W YHR032W-AP0C5N6 59 aa3.22□□□□□ -1.89
SIR1YKR101W TAH1P25638 111 aaPredicted RBP3.22□□□□□ -1.89
SIR1YKR101W SEC17P32602 292 aa3.22□□□□□ -1.89
SIR1YKR101W YHL026CP38740 315 aa3.22□□□□□ -1.89
SIR1YKR101W TVP23P38962 199 aa3.22□□□□□ -1.89
SIR1YKR101W SRP14P38985 146 aa3.22□□□□□ -1.89
SIR1YKR101W ARC15P40518 154 aaRIP-Chip data3.22□□□□□ -1.89not detected
SIR1YKR101W YNL184CP53876 108 aa3.22□□□□□ -1.89
SIR1YKR101W APJ1P53940 528 aa3.22□□□□□ -1.89
SIR1YKR101W YOL024WQ08172 172 aa3.22□□□□□ -1.89
SIR1YKR101W FEX1Q08913 375 aa3.22□□□□□ -1.89
SIR1YKR101W FEX2Q08991 375 aa3.22□□□□□ -1.89
SIR1YKR101W YFR032C-BQ8TGU2 87 aa3.22□□□□□ -1.89
SIR1YKR101W GRX2P17695 143 aaKnown RBP3.21□□□□□ -1.89
SIR1YKR101W TRR1P29509 319 aaKnown RBP3.21□□□□□ -1.89
SIR1YKR101W RMD6P39975 231 aa3.21□□□□□ -1.89
SIR1YKR101W YKE4P40544 346 aa3.21□□□□□ -1.89
SIR1YKR101W TRM12Q04235 462 aa3.21□□□□□ -1.89
SIR1YKR101W PEX12Q04370 399 aa3.21□□□□□ -1.89
SIR1YKR101W JAC1P53193 184 aa3.21□□□□□ -1.9
SIR1YKR101W YPL162CQ12042 273 aa3.21□□□□□ -1.9
SIR1YKR101W PSF1Q12488 208 aa3.21□□□□□ -1.9
SIR1YKR101W REP2P03872 296 aa3.2□□□□□ -1.9
SIR1YKR101W RPL9AP05738 191 aaKnown RBP3.2□□□□□ -1.9
SIR1YKR101W RSA4P25382 515 aaKnown RBP3.2□□□□□ -1.9
SIR1YKR101W YCR090CP25654 182 aaKnown RBP3.2□□□□□ -1.9
SIR1YKR101W VPS51P36116 164 aa3.2□□□□□ -1.9
SIR1YKR101W PDS1P40316 373 aaPredicted RBP3.2□□□□□ -1.9
SIR1YKR101W RPL9BP51401 191 aaKnown RBP3.2□□□□□ -1.9
SIR1YKR101W SAS5Q99314 248 aa3.2□□□□□ -1.9
SIR1YKR101W YLR156WP0CE96 114 aa3.2□□□□□ -1.9
SIR1YKR101W YLR159WP0CE97 114 aa3.2□□□□□ -1.9
SIR1YKR101W YLR161WP0CE98 114 aa3.2□□□□□ -1.9
SIR1YKR101W DPM1P14020 267 aaKnown RBP3.2□□□□□ -1.9
SIR1YKR101W KDX1P36005 433 aa3.2□□□□□ -1.9
SIR1YKR101W POP4P38336 279 aa3.2□□□□□ -1.9
SIR1YKR101W AST2P39945 430 aaKnown RBP3.2□□□□□ -1.9
SIR1YKR101W YER188WP40103 239 aa3.2□□□□□ -1.9
SIR1YKR101W EFM5P53200 248 aaKnown RBP3.2□□□□□ -1.9
SIR1YKR101W YMR315WQ04869 349 aaKnown RBP3.2□□□□□ -1.9
SIR1YKR101W BRX1Q08235 291 aaKnown RBP3.2□□□□□ -1.9
SIR1YKR101W SIR2P06700 562 aa3.19□□□□□ -1.9
SIR1YKR101W KRE1P17260 313 aa3.19□□□□□ -1.9
SIR1YKR101W ATG22P25568 528 aa3.19□□□□□ -1.9
SIR1YKR101W TIM8P57744 87 aa3.19□□□□□ -1.9
SIR1YKR101W YDR249CQ03787 373 aa3.19□□□□□ -1.9
SIR1YKR101W YPR195CQ06594 109 aa3.19□□□□□ -1.9
SIR1YKR101W MCP1Q12106 302 aa3.19□□□□□ -1.9
SIR1YKR101W MAG1P22134 296 aaKnown RBP3.18□□□□□ -1.9
SIR1YKR101W CNB1P25296 175 aa3.18□□□□□ -1.9
SIR1YKR101W TRX3P25372 127 aa3.18□□□□□ -1.9
SIR1YKR101W CLG1P35190 452 aa3.18□□□□□ -1.9
SIR1YKR101W YER076CP40049 302 aa3.18□□□□□ -1.9
SIR1YKR101W TIF34P40217 347 aaKnown RBP3.18□□□□□ -1.9
SIR1YKR101W BUD13P46947 266 aaPredicted RBP3.18□□□□□ -1.9
SIR1YKR101W YNL247WP53852 767 aaKnown RBP3.18□□□□□ -1.9
SIR1YKR101W FAB1P34756 2278 aa3.18□□□□□ -1.9
SIR1YKR101W HAP2P06774 265 aa3.18□□□□□ -1.9
SIR1YKR101W YET1P35723 206 aa3.18□□□□□ -1.9
SIR1YKR101W MAK5P38112 773 aaPredicted RBP3.18□□□□□ -1.9
SIR1YKR101W ICE2P40499 491 aa3.18□□□□□ -1.9
SIR1YKR101W FKS1P38631 1876 aaKnown RBP3.17□□□□□ -1.9
SIR1YKR101W YKR032WP36127 104 aa3.17□□□□□ -1.9
SIR1YKR101W YDR114CQ04597 100 aa3.17□□□□□ -1.9
SIR1YKR101W YLR036CQ07986 203 aa3.17□□□□□ -1.9
SIR1YKR101W YOR283WQ12040 230 aaKnown RBP3.17□□□□□ -1.9
SIR1YKR101W ECM29P38737 1868 aa3.17□□□□□ -1.9
SIR1YKR101W ADH3P07246 375 aaKnown RBP3.16□□□□□ -1.9
SIR1YKR101W FMT1P32785 401 aa3.16□□□□□ -1.9
SIR1YKR101W FES1P38260 290 aa3.16□□□□□ -1.9
SIR1YKR101W ARP3P47117 449 aaKnown RBP3.16□□□□□ -1.9
SIR1YKR101W AKR2Q12013 749 aa3.16□□□□□ -1.9
SIR1YKR101W MBF1O14467 151 aaKnown RBP3.16□□□□□ -1.9
SIR1YKR101W PHO13P19881 312 aa3.16□□□□□ -1.9
SIR1YKR101W ARO7P32178 256 aa3.16□□□□□ -1.9
SIR1YKR101W UBC6P33296 250 aaPredicted RBP3.16□□□□□ -1.9
SIR1YKR101W AME1P38313 324 aa3.16□□□□□ -1.9
SIR1YKR101W CDC8P00572 216 aa3.15□□□□□ -1.91
SIR1YKR101W CCA1P21269 546 aa3.15□□□□□ -1.91
SIR1YKR101W SPG3Q04398 127 aaPredicted RBP3.15□□□□□ -1.91
SIR1YKR101W RPB3P16370 318 aaKnown RBP3.14□□□□□ -1.91
SIR1YKR101W GLE2P40066 365 aa3.14□□□□□ -1.91
SIR1YKR101W YJR146WP47174 117 aa3.14□□□□□ -1.91
SIR1YKR101W FMP23P38231 175 aa3.14□□□□□ -1.91
SIR1YKR101W MZM1Q03429 123 aaPredicted RBP3.14□□□□□ -1.91
SIR1YKR101W ARR2Q06597 130 aa3.14□□□□□ -1.91
SIR1YKR101W PET9P18239 318 aaKnown RBP3.13□□□□□ -1.91
SIR1YKR101W VMA11P32842 164 aa3.13□□□□□ -1.91
SIR1YKR101W NVJ1P38881 321 aa3.13□□□□□ -1.91
SIR1YKR101W PRM10P42946 383 aa3.13□□□□□ -1.91
SIR1YKR101W ARO8P53090 500 aaKnown RBP3.13□□□□□ -1.91
SIR1YKR101W YGL088WP53151 121 aa3.13□□□□□ -1.91
SIR1YKR101W YGR026WP53217 278 aa3.13□□□□□ -1.91
SIR1YKR101W DAS2Q12084 232 aa3.13□□□□□ -1.91
SIR1YKR101W ATP15P21306 62 aa3.12□□□□□ -1.91
SIR1YKR101W MIG1P27705 504 aa3.12□□□□□ -1.91
SIR1YKR101W SDH4P37298 181 aa3.12□□□□□ -1.91
SIR1YKR101W MOB1P40484 314 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms