RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	ARP3	P47117	449 aa	Known RBP	1.02	□□□□□ -2.25
NUP82	YJL061W	YMR295C	Q03559	197 aa		1.02	□□□□□ -2.25
NUP82	YJL061W	YLR031W	Q07978	186 aa		1.02	□□□□□ -2.25
NUP82	YJL061W	EDC3	P39998	551 aa	Known RBP	1.01	□□□□□ -2.25
NUP82	YJL061W	FLX1	P40464	311 aa		1.01	□□□□□ -2.25
NUP82	YJL061W	YAE1	P47118	141 aa	Predicted RBP	1.01	□□□□□ -2.25
NUP82	YJL061W	ARO8	P53090	500 aa	Known RBP	1.01	□□□□□ -2.25
NUP82	YJL061W	YLR036C	Q07986	203 aa		1.01	□□□□□ -2.25
NUP82	YJL061W	IGO2	Q9P305	131 aa		1.01	□□□□□ -2.25
NUP82	YJL061W	YAR023C	D6VPM8	179 aa		1.01	□□□□□ -2.25
NUP82	YJL061W	MDM35	O60200	86 aa		1.01	□□□□□ -2.25
NUP82	YJL061W	VAR1	P02381	398 aa		1.01	□□□□□ -2.25
NUP82	YJL061W	SNF4	P12904	322 aa		1.01	□□□□□ -2.25
NUP82	YJL061W	YPL073C	P40323	161 aa		1.01	□□□□□ -2.25
NUP82	YJL061W	RTC4	P53850	401 aa		1.01	□□□□□ -2.25
NUP82	YJL061W	MTW1	P39731	289 aa		1	□□□□□ -2.25
NUP82	YJL061W	TMA22	P47089	198 aa	Predicted RBP	1	□□□□□ -2.25
NUP82	YJL061W	YNL184C	P53876	108 aa		1	□□□□□ -2.25
NUP82	YJL061W	CWC27	Q02770	301 aa		1	□□□□□ -2.25
NUP82	YJL061W	YMR099C	Q03161	297 aa	Known RBP	1	□□□□□ -2.25
NUP82	YJL061W	PDS1	P40316	373 aa	Predicted RBP	1	□□□□□ -2.25
NUP82	YJL061W	YNL247W	P53852	767 aa	Known RBP	1	□□□□□ -2.25
NUP82	YJL061W	YOL014W	Q08110	124 aa		1	□□□□□ -2.25
NUP82	YJL061W	IRC23	Q08416	157 aa		1	□□□□□ -2.25
NUP82	YJL061W	YJR111C	P47148	283 aa	Known RBP	0.99	□□□□□ -2.25
NUP82	YJL061W	SHH3	Q04487	196 aa		0.99	□□□□□ -2.25
NUP82	YJL061W	YMR315W	Q04869	349 aa	Known RBP	0.99	□□□□□ -2.25
NUP82	YJL061W	YML100W-A	Q8TGT0	57 aa		0.99	□□□□□ -2.25
NUP82	YJL061W	YHL042W	P38729	150 aa		0.98	□□□□□ -2.25
NUP82	YJL061W	HYR1	P40581	163 aa	Known RBP	0.98	□□□□□ -2.25
NUP82	YJL061W	TDA4	P47153	279 aa		0.98	□□□□□ -2.25
NUP82	YJL061W	UBC12	P52491	188 aa		0.98	□□□□□ -2.25
NUP82	YJL061W	DAD4	P69851	72 aa		0.98	□□□□□ -2.25
NUP82	YJL061W	ARO80	Q04052	950 aa		0.98	□□□□□ -2.25
NUP82	YJL061W	PRP11	Q07350	266 aa	Predicted RBP	0.98	□□□□□ -2.25
NUP82	YJL061W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.98	□□□□□ -2.25
NUP82	YJL061W	RAD9	P14737	1309 aa		0.98	□□□□□ -2.25
NUP82	YJL061W	CAF4	P36130	643 aa		0.98	□□□□□ -2.25
NUP82	YJL061W	YOL024W	Q08172	172 aa		0.98	□□□□□ -2.25
NUP82	YJL061W	PHO85	P17157	305 aa		0.97	□□□□□ -2.25
NUP82	YJL061W	MGT1	P26188	188 aa		0.97	□□□□□ -2.25
NUP82	YJL061W	CUP9	P41817	306 aa		0.97	□□□□□ -2.25
NUP82	YJL061W	RPS24A	P0CX31	135 aa	Known RBP	0.97	□□□□□ -2.25
NUP82	YJL061W	RPS24B	P0CX32	135 aa	Known RBP	0.97	□□□□□ -2.25
NUP82	YJL061W	FMP23	P38231	175 aa		0.97	□□□□□ -2.25
NUP82	YJL061W	YHL018W	P38744	120 aa	Predicted RBP	0.97	□□□□□ -2.25
NUP82	YJL061W	SOK1	P40317	901 aa		0.97	□□□□□ -2.25
NUP82	YJL061W	YFH7	P43591	353 aa		0.97	□□□□□ -2.25
NUP82	YJL061W	VPS71	Q03433	280 aa		0.97	□□□□□ -2.25
NUP82	YJL061W	NAT3	Q06504	195 aa		0.97	□□□□□ -2.25
NUP82	YJL061W	YPR013C	Q12145	317 aa		0.97	□□□□□ -2.25
NUP82	YJL061W	YPR014C	Q6B0W2	109 aa		0.97	□□□□□ -2.25
NUP82	YJL061W	COX8	P04039	78 aa		0.96	□□□□□ -2.26
NUP82	YJL061W	TAH1	P25638	111 aa	Predicted RBP	0.96	□□□□□ -2.26
NUP82	YJL061W	SFK1	P35735	353 aa		0.96	□□□□□ -2.26
NUP82	YJL061W	PAM17	P36147	197 aa		0.96	□□□□□ -2.26
NUP82	YJL061W	HPA3	P39979	161 aa		0.96	□□□□□ -2.26
NUP82	YJL061W	YFL065C	P43539	102 aa		0.96	□□□□□ -2.26
NUP82	YJL061W	NOC4	Q06512	552 aa	Predicted RBP	0.96	□□□□□ -2.26
NUP82	YJL061W	TIR1	P10863	254 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	NSP1	P14907	823 aa	Known RBP	0.95	□□□□□ -2.26
NUP82	YJL061W	TRX3	P25372	127 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	YEL067C	P39978	195 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	YNL033W	P53964	284 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	YMR007W	Q03675	126 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	YMR253C	Q04835	414 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	RNH202	Q05635	350 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	AQY2	P0CD90	149 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	ADE1	P27616	306 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	ARO7	P32178	256 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	SHG1	P38337	142 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	YFL019C	P43576	117 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	YMR252C	Q04814	134 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	YOR342C	Q12182	319 aa		0.95	□□□□□ -2.26
NUP82	YJL061W	GSP2	P32836	220 aa	Known RBP	0.94	□□□□□ -2.26
NUP82	YJL061W	RPB7	P34087	171 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	NSG1	P38837	291 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	SPC25	P40014	221 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	HOP2	P53187	214 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	THG1	P53215	237 aa	Known RBP	0.94	□□□□□ -2.26
NUP82	YJL061W	PGA1	P53896	198 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	AIM34	Q03673	198 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	GRX3	Q03835	250 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	FIT2	Q08906	153 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	YLR412C-A	Q3E742	68 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	IDP1	P21954	428 aa	Known RBP	0.94	□□□□□ -2.26
NUP82	YJL061W	FMP32	P43557	207 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	ALB1	P47019	175 aa	Predicted RBP	0.94	□□□□□ -2.26
NUP82	YJL061W	UPS3	Q04006	179 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	YET3	Q07451	203 aa		0.94	□□□□□ -2.26
NUP82	YJL061W	YHR212W-A	P0CX91	67 aa		0.93	□□□□□ -2.26
NUP82	YJL061W	NRK1	P53915	240 aa		0.93	□□□□□ -2.26
NUP82	YJL061W	APA2	P22108	325 aa		0.92	□□□□□ -2.26
NUP82	YJL061W	NSA2	P40078	261 aa	Known RBP	0.92	□□□□□ -2.26
NUP82	YJL061W	GIM3	P53900	129 aa		0.92	□□□□□ -2.26
NUP82	YJL061W	DIG2	Q03373	323 aa	Known RBP	0.92	□□□□□ -2.26
NUP82	YJL061W	GRX8	Q05926	109 aa		0.92	□□□□□ -2.26
NUP82	YJL061W	MPD1	Q12404	318 aa	Known RBP	0.92	□□□□□ -2.26
NUP82	YJL061W	YCR023C	P25351	611 aa		0.92	□□□□□ -2.26
NUP82	YJL061W	GPI14	P47088	403 aa	Known RBP	0.92	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 86.2 ms