RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W YGR151CP53287 111 aa5.52□□□□□ -1.53
NUP49YGL172W PAM18Q07914 168 aa5.52□□□□□ -1.53
NUP49YGL172W ATG5Q12380 294 aa5.52□□□□□ -1.53
NUP49YGL172W BGL2P15703 313 aaKnown RBP5.51□□□□□ -1.53
NUP49YGL172W CKS1P20486 150 aaKnown RBP5.51□□□□□ -1.53
NUP49YGL172W MRS4P23500 304 aa5.51□□□□□ -1.53
NUP49YGL172W YCR061WP25639 631 aa5.51□□□□□ -1.53
NUP49YGL172W SPS18P32572 300 aa5.51□□□□□ -1.53
NUP49YGL172W YPC1P38298 316 aa5.51□□□□□ -1.53
NUP49YGL172W YIP1P53039 248 aa5.51□□□□□ -1.53
NUP49YGL172W DUO1P53168 247 aaKnown RBP5.51□□□□□ -1.53
NUP49YGL172W YNL234WP53857 426 aa5.51□□□□□ -1.53
NUP49YGL172W RRT7Q07829 113 aa5.51□□□□□ -1.53
NUP49YGL172W YJR112W-AQ3E743 109 aa5.51□□□□□ -1.53
NUP49YGL172W YBR255C-AQ3E776 120 aa5.51□□□□□ -1.53
NUP49YGL172W STD1Q02794 444 aa5.5□□□□□ -1.53
NUP49YGL172W FSH2Q05015 223 aa5.5□□□□□ -1.53
NUP49YGL172W AEP3Q12089 606 aa5.5□□□□□ -1.53
NUP49YGL172W JID1Q12350 301 aa5.5□□□□□ -1.53
NUP49YGL172W VPS63O13549 108 aa5.49□□□□□ -1.53
NUP49YGL172W PHO85P17157 305 aa5.49□□□□□ -1.53
NUP49YGL172W SRY1P36007 326 aa5.49□□□□□ -1.53
NUP49YGL172W PTC7P38797 343 aa5.49□□□□□ -1.53
NUP49YGL172W MSO1P53604 210 aaKnown RBP5.49□□□□□ -1.53
NUP49YGL172W YMR166CQ03829 368 aa5.49□□□□□ -1.53
NUP49YGL172W YLR224WQ05947 369 aa5.49□□□□□ -1.53
NUP49YGL172W YLR146W-AQ2V2P1 62 aa5.49□□□□□ -1.53
NUP49YGL172W YBR126W-AQ8TGU7 68 aa5.49□□□□□ -1.53
NUP49YGL172W YLR302CO13544 120 aa5.48□□□□□ -1.53
NUP49YGL172W SEC22P22214 214 aa5.48□□□□□ -1.53
NUP49YGL172W RAD23P32628 398 aaKnown RBP5.48□□□□□ -1.53
NUP49YGL172W PDC2P32896 925 aa5.48□□□□□ -1.53
NUP49YGL172W RPL13BP40212 199 aaKnown RBP5.48□□□□□ -1.53
NUP49YGL172W RFC2P40348 353 aa5.48□□□□□ -1.53
NUP49YGL172W ARP3P47117 449 aaKnown RBP5.48□□□□□ -1.53
NUP49YGL172W YJR111CP47148 283 aaKnown RBP5.48□□□□□ -1.53
NUP49YGL172W PKP2P53170 491 aa5.48□□□□□ -1.53
NUP49YGL172W CRH1P53301 507 aa5.48□□□□□ -1.53
NUP49YGL172W GPI15P53961 229 aa5.48□□□□□ -1.53
NUP49YGL172W YPL108WQ02872 168 aaPredicted RBP5.48□□□□□ -1.53
NUP49YGL172W SRL1Q08673 210 aa5.48□□□□□ -1.53
NUP49YGL172W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
NUP49YGL172W RAX2Q12465 1220 aa5.48□□□□□ -1.53
NUP49YGL172W RPL13AQ12690 199 aaPredicted RBP5.48□□□□□ -1.53
NUP49YGL172W YGL194C-AQ2V2P6 80 aa5.48□□□□□ -1.53
NUP49YGL172W YLR415CO13578 112 aa5.48□□□□□ -1.53
NUP49YGL172W HTB1P02293 131 aaKnown RBP5.48□□□□□ -1.53
NUP49YGL172W SRL3P36167 246 aa5.48□□□□□ -1.53
NUP49YGL172W ATP3P38077 311 aaKnown RBP5.48□□□□□ -1.53
NUP49YGL172W ECM31P38122 312 aa5.48□□□□□ -1.53
NUP49YGL172W CDS1P38221 457 aa5.48□□□□□ -1.53
NUP49YGL172W URM1P40554 99 aaPredicted RBP5.48□□□□□ -1.53
NUP49YGL172W MRPL50P53724 139 aa5.48□□□□□ -1.53
NUP49YGL172W YIF1P53845 314 aaKnown RBP5.48□□□□□ -1.53
NUP49YGL172W DUG3P53871 357 aa5.48□□□□□ -1.53
NUP49YGL172W ACT1P60010 375 aaKnown RBP5.48□□□□□ -1.53
NUP49YGL172W DID2P69771 204 aa5.48□□□□□ -1.53
NUP49YGL172W ATG31Q12421 196 aa5.48□□□□□ -1.53
NUP49YGL172W AIM45Q12480 344 aaKnown RBP5.48□□□□□ -1.53
NUP49YGL172W NOP1P15646 327 aaKnown RBP5.47□□□□□ -1.53
NUP49YGL172W MAG1P22134 296 aaKnown RBP5.47□□□□□ -1.53
NUP49YGL172W ERV1P27882 189 aa5.47□□□□□ -1.53
NUP49YGL172W SUA7P29055 345 aaPredicted RBP5.47□□□□□ -1.53
NUP49YGL172W YKL162CP36052 402 aa5.47□□□□□ -1.53
NUP49YGL172W DFG10P40526 253 aa5.47□□□□□ -1.53
NUP49YGL172W ECM27P47144 725 aa5.47□□□□□ -1.53
NUP49YGL172W PNC1P53184 216 aaKnown RBP5.47□□□□□ -1.53
NUP49YGL172W COX18P53239 316 aa5.47□□□□□ -1.53
NUP49YGL172W PLP1Q04004 230 aa5.47□□□□□ -1.53
NUP49YGL172W YMR090WQ04304 227 aaKnown RBP5.47□□□□□ -1.53
NUP49YGL172W ERP1Q05359 219 aaKnown RBP5.47□□□□□ -1.53
NUP49YGL172W MCH1Q07376 486 aa5.47□□□□□ -1.53
NUP49YGL172W NDE2Q07500 545 aa5.47□□□□□ -1.53
NUP49YGL172W ISN1Q99312 450 aa5.47□□□□□ -1.53
NUP49YGL172W URA5P13298 226 aaKnown RBP5.46□□□□□ -1.54
NUP49YGL172W TOM40P23644 387 aaKnown RBP5.46□□□□□ -1.54
NUP49YGL172W YEA6P39953 335 aa5.46□□□□□ -1.54
NUP49YGL172W YDL183CP48569 320 aa5.46□□□□□ -1.54
NUP49YGL172W JAC1P53193 184 aa5.46□□□□□ -1.54
NUP49YGL172W YGR050CP53231 118 aa5.46□□□□□ -1.54
NUP49YGL172W YNG1Q08465 219 aa5.46□□□□□ -1.54
NUP49YGL172W COA2Q3E823 68 aa5.46□□□□□ -1.54
NUP49YGL172W YKR045CP36138 183 aa5.45□□□□□ -1.54
NUP49YGL172W VMA22P38784 181 aa5.45□□□□□ -1.54
NUP49YGL172W GEP4P38812 185 aa5.45□□□□□ -1.54
NUP49YGL172W SWM2P40342 146 aa5.45□□□□□ -1.54
NUP49YGL172W AGX1P43567 385 aa5.45□□□□□ -1.54
NUP49YGL172W WWM1P43582 211 aaKnown RBP5.45□□□□□ -1.54
NUP49YGL172W TAD2P47058 250 aa5.45□□□□□ -1.54
NUP49YGL172W DYN2Q02647 92 aa5.45□□□□□ -1.54
NUP49YGL172W MSA1Q08471 629 aa5.45□□□□□ -1.54
NUP49YGL172W POM34Q12445 299 aa5.45□□□□□ -1.54
NUP49YGL172W FEN2P25621 512 aaKnown RBP5.44□□□□□ -1.54
NUP49YGL172W SLM6P38343 150 aa5.44□□□□□ -1.54
NUP49YGL172W YGL117WP53133 265 aa5.44□□□□□ -1.54
NUP49YGL172W TIM44Q01852 431 aa5.44□□□□□ -1.54
NUP49YGL172W EST3Q03096 181 aa5.44□□□□□ -1.54
NUP49YGL172W ANT1Q06497 328 aa5.44□□□□□ -1.54
NUP49YGL172W YPL264CQ08980 353 aa5.44□□□□□ -1.54
NUP49YGL172W FCF2Q12035 217 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 202.9 ms