RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	UBC7	Q02159	165 aa		0.66	□□□□□ -2.3
SCW11	YGL028C	DYN3	Q04949	312 aa		0.66	□□□□□ -2.3
SCW11	YGL028C	MSB2	P32334	1306 aa		0.66	□□□□□ -2.3
SCW11	YGL028C	YAR023C	D6VPM8	179 aa		0.65	□□□□□ -2.31
SCW11	YGL028C	YPK2	P18961	677 aa		0.65	□□□□□ -2.31
SCW11	YGL028C	YCR090C	P25654	182 aa	Known RBP	0.65	□□□□□ -2.31
SCW11	YGL028C	YER134C	P40081	178 aa		0.65	□□□□□ -2.31
SCW11	YGL028C	YAE1	P47118	141 aa	Predicted RBP	0.65	□□□□□ -2.31
SCW11	YGL028C	YNL247W	P53852	767 aa	Known RBP	0.65	□□□□□ -2.31
SCW11	YGL028C	DAD4	P69851	72 aa		0.65	□□□□□ -2.31
SCW11	YGL028C	YMR315W	Q04869	349 aa	Known RBP	0.65	□□□□□ -2.31
SCW11	YGL028C	YNL146C-A	Q3E7Z1	64 aa		0.65	□□□□□ -2.31
SCW11	YGL028C	VAR1	P02381	398 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	RIO2	P40160	425 aa	Known RBP	0.64	□□□□□ -2.31
SCW11	YGL028C	YPL073C	P40323	161 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	YJR111C	P47148	283 aa	Known RBP	0.64	□□□□□ -2.31
SCW11	YGL028C	TDA4	P47153	279 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	ARO8	P53090	500 aa	Known RBP	0.64	□□□□□ -2.31
SCW11	YGL028C	RNH202	Q05635	350 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	FUS2	Q05670	677 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	NAT3	Q06504	195 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	YHR007C-A	Q07074	71 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	YLR031W	Q07978	186 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	MDM35	O60200	86 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	APA2	P22108	325 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	YHL018W	P38744	120 aa	Predicted RBP	0.64	□□□□□ -2.31
SCW11	YGL028C	YFL065C	P43539	102 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	THG1	P53215	237 aa	Known RBP	0.64	□□□□□ -2.31
SCW11	YGL028C	CWC27	Q02770	301 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	YPR174C	Q06616	221 aa	Predicted RBP	0.64	□□□□□ -2.31
SCW11	YGL028C	IRC23	Q08416	157 aa		0.64	□□□□□ -2.31
SCW11	YGL028C	TIR1	P10863	254 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	SNF4	P12904	322 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	MGT1	P26188	188 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	YHL042W	P38729	150 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	TVP23	P38962	199 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	AIM2	P39721	246 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	MTW1	P39731	289 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	HPA3	P39979	161 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	PDS1	P40316	373 aa	Predicted RBP	0.63	□□□□□ -2.31
SCW11	YGL028C	YFL019C	P43576	117 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	RTC4	P53850	401 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	YMR099C	Q03161	297 aa	Known RBP	0.63	□□□□□ -2.31
SCW11	YGL028C	RCE1	Q03530	315 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	YMR295C	Q03559	197 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	YMR252C	Q04814	134 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	YOL014W	Q08110	124 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	YOL024W	Q08172	172 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	IGO2	Q9P305	131 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	RAD9	P14737	1309 aa		0.63	□□□□□ -2.31
SCW11	YGL028C	IDP1	P21954	428 aa	Known RBP	0.62	□□□□□ -2.31
SCW11	YGL028C	EDC3	P39998	551 aa	Known RBP	0.62	□□□□□ -2.31
SCW11	YGL028C	YFH7	P43591	353 aa		0.62	□□□□□ -2.31
SCW11	YGL028C	NRK1	P53915	240 aa		0.62	□□□□□ -2.31
SCW11	YGL028C	YNL033W	P53964	284 aa		0.62	□□□□□ -2.31
SCW11	YGL028C	SHH3	Q04487	196 aa		0.62	□□□□□ -2.31
SCW11	YGL028C	NOC4	Q06512	552 aa	Predicted RBP	0.62	□□□□□ -2.31
SCW11	YGL028C	PRP11	Q07350	266 aa	Predicted RBP	0.62	□□□□□ -2.31
SCW11	YGL028C	YLR036C	Q07986	203 aa		0.62	□□□□□ -2.31
SCW11	YGL028C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.62	□□□□□ -2.31
SCW11	YGL028C	YML100W-A	Q8TGT0	57 aa		0.62	□□□□□ -2.31
SCW11	YGL028C	COX8	P04039	78 aa		0.61	□□□□□ -2.31
SCW11	YGL028C	YKR041W	P36134	250 aa		0.61	□□□□□ -2.31
SCW11	YGL028C	PAM17	P36147	197 aa		0.61	□□□□□ -2.31
SCW11	YGL028C	ECM4	P36156	370 aa		0.61	□□□□□ -2.31
SCW11	YGL028C	YEL067C	P39978	195 aa		0.61	□□□□□ -2.31
SCW11	YGL028C	YEL008W	P40001	126 aa		0.61	□□□□□ -2.31
SCW11	YGL028C	HYR1	P40581	163 aa	Known RBP	0.61	□□□□□ -2.31
SCW11	YGL028C	PGA1	P53896	198 aa		0.61	□□□□□ -2.31
SCW11	YGL028C	FIT2	Q08906	153 aa		0.61	□□□□□ -2.31
SCW11	YGL028C	YPR013C	Q12145	317 aa		0.61	□□□□□ -2.31
SCW11	YGL028C	TAH1	P25638	111 aa	Predicted RBP	0.6	□□□□□ -2.31
SCW11	YGL028C	RPB7	P34087	171 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	CAF4	P36130	643 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	SHG1	P38337	142 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	SPC25	P40014	221 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	VPS71	Q03433	280 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	YMR253C	Q04835	414 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	GRX8	Q05926	109 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	YOR342C	Q12182	319 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	PST2	Q12335	198 aa	Known RBP	0.6	□□□□□ -2.31
SCW11	YGL028C	YLR412C-A	Q3E742	68 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	DUR1,2	P32528	1835 aa	Known RBP	0.6	□□□□□ -2.31
SCW11	YGL028C	ARO7	P32178	256 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	CLG1	P35190	452 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	NSG1	P38837	291 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	YNL200C	P40165	246 aa	Known RBP	0.6	□□□□□ -2.31
SCW11	YGL028C	CUP9	P41817	306 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	FMP32	P43557	207 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	ALB1	P47019	175 aa	Predicted RBP	0.6	□□□□□ -2.31
SCW11	YGL028C	GPI14	P47088	403 aa	Known RBP	0.6	□□□□□ -2.31
SCW11	YGL028C	TMA22	P47089	198 aa	Predicted RBP	0.6	□□□□□ -2.31
SCW11	YGL028C	JAC1	P53193	184 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	SNO1	Q03144	224 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	ATP20	Q12233	115 aa		0.6	□□□□□ -2.31
SCW11	YGL028C	MPD1	Q12404	318 aa	Known RBP	0.6	□□□□□ -2.31
SCW11	YGL028C	RIF1	P29539	1916 aa		0.59	□□□□□ -2.31
SCW11	YGL028C	RPS24A	P0CX31	135 aa	Known RBP	0.59	□□□□□ -2.32
SCW11	YGL028C	RPS24B	P0CX32	135 aa	Known RBP	0.59	□□□□□ -2.32
SCW11	YGL028C	YHR212W-A	P0CX91	67 aa		0.59	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms