RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W Q0255P03881 472 aa3.41□□□□□ -1.86
DEG1YFL001W RPL25P04456 142 aaKnown RBP3.41□□□□□ -1.86
DEG1YFL001W NOP1P15646 327 aaKnown RBP3.41□□□□□ -1.86
DEG1YFL001W UBC6P33296 250 aaPredicted RBP3.41□□□□□ -1.86
DEG1YFL001W YHL026CP38740 315 aa3.41□□□□□ -1.86
DEG1YFL001W YHR125WP38831 101 aa3.41□□□□□ -1.86
DEG1YFL001W TVP23P38962 199 aa3.41□□□□□ -1.86
DEG1YFL001W AIM25P47140 327 aa3.41□□□□□ -1.86
DEG1YFL001W NRK1P53915 240 aa3.41□□□□□ -1.86
DEG1YFL001W PEX12Q04370 399 aa3.41□□□□□ -1.86
DEG1YFL001W YDR114CQ04597 100 aa3.41□□□□□ -1.86
DEG1YFL001W NOC4Q06512 552 aaPredicted RBP3.41□□□□□ -1.86
DEG1YFL001W YPD1Q07688 167 aa3.41□□□□□ -1.86
DEG1YFL001W TDA8Q6B2U8 126 aa3.41□□□□□ -1.86
DEG1YFL001W ECM29P38737 1868 aa3.4□□□□□ -1.86
DEG1YFL001W YPR170W-BP0C5R9 85 aa3.4□□□□□ -1.87
DEG1YFL001W PTM1P32857 523 aa3.4□□□□□ -1.87
DEG1YFL001W RMD6P39975 231 aa3.4□□□□□ -1.87
DEG1YFL001W TIF34P40217 347 aaKnown RBP3.4□□□□□ -1.87
DEG1YFL001W COG5P53951 403 aa3.4□□□□□ -1.87
DEG1YFL001W SPC24Q04477 213 aa3.4□□□□□ -1.87
DEG1YFL001W ATG39Q06159 398 aa3.4□□□□□ -1.87
DEG1YFL001W YHR214C-EQ8TGK0 99 aa3.4□□□□□ -1.87
DEG1YFL001W GCY1P14065 312 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
DEG1YFL001W MAG1P22134 296 aaKnown RBP3.39□□□□□ -1.87
DEG1YFL001W RSA4P25382 515 aaKnown RBP3.39□□□□□ -1.87
DEG1YFL001W SRP102P36057 244 aaPredicted RBP3.39□□□□□ -1.87
DEG1YFL001W SOK1P40317 901 aa3.39□□□□□ -1.87
DEG1YFL001W APS3P47064 194 aa3.39□□□□□ -1.87
DEG1YFL001W YGR042WP53227 271 aa3.39□□□□□ -1.87
DEG1YFL001W PRM15Q03262 622 aa3.39□□□□□ -1.87
DEG1YFL001W YOL160WQ08321 113 aa3.39□□□□□ -1.87
DEG1YFL001W SAS5Q99314 248 aa3.39□□□□□ -1.87
DEG1YFL001W HAP2P06774 265 aa3.38□□□□□ -1.87
DEG1YFL001W ATG22P25568 528 aa3.38□□□□□ -1.87
DEG1YFL001W TRR1P29509 319 aaKnown RBP3.38□□□□□ -1.87
DEG1YFL001W POP4P38336 279 aa3.38□□□□□ -1.87
DEG1YFL001W SRP14P38985 146 aa3.38□□□□□ -1.87
DEG1YFL001W YER084WP40057 128 aa3.38□□□□□ -1.87
DEG1YFL001W YER188WP40103 239 aa3.38□□□□□ -1.87
DEG1YFL001W PIR5P46999 287 aa3.38□□□□□ -1.87
DEG1YFL001W GRX8Q05926 109 aa3.38□□□□□ -1.87
DEG1YFL001W FEX1Q08913 375 aa3.38□□□□□ -1.87
DEG1YFL001W FEX2Q08991 375 aa3.38□□□□□ -1.87
DEG1YFL001W YOR289WQ12012 251 aaPredicted RBP3.38□□□□□ -1.87
DEG1YFL001W DAS2Q12084 232 aa3.38□□□□□ -1.87
DEG1YFL001W IGO2Q9P305 131 aa3.38□□□□□ -1.87
DEG1YFL001W DPM1P14020 267 aaKnown RBP3.37□□□□□ -1.87
DEG1YFL001W TAH1P25638 111 aaPredicted RBP3.37□□□□□ -1.87
DEG1YFL001W SEC17P32602 292 aa3.37□□□□□ -1.87
DEG1YFL001W UTP11P34247 250 aaPredicted RBP3.37□□□□□ -1.87
DEG1YFL001W FES1P38260 290 aa3.37□□□□□ -1.87
DEG1YFL001W PDS1P40316 373 aaPredicted RBP3.37□□□□□ -1.87
DEG1YFL001W ALB1P47019 175 aaPredicted RBP3.37□□□□□ -1.87
DEG1YFL001W JAC1P53193 184 aa3.37□□□□□ -1.87
DEG1YFL001W YNL184CP53876 108 aa3.37□□□□□ -1.87
DEG1YFL001W YNL140CP53910 189 aa3.37□□□□□ -1.87
DEG1YFL001W YLR460CP54007 376 aa3.37□□□□□ -1.87
DEG1YFL001W MZM1Q03429 123 aaPredicted RBP3.37□□□□□ -1.87
DEG1YFL001W GAS3Q03655 524 aa3.37□□□□□ -1.87
DEG1YFL001W YOL024WQ08172 172 aa3.37□□□□□ -1.87
DEG1YFL001W PSF1Q12488 208 aa3.37□□□□□ -1.87
DEG1YFL001W REP2P03872 296 aa3.36□□□□□ -1.87
DEG1YFL001W RPL9AP05738 191 aaKnown RBP3.36□□□□□ -1.87
DEG1YFL001W SIR2P06700 562 aa3.36□□□□□ -1.87
DEG1YFL001W CCA1P21269 546 aa3.36□□□□□ -1.87
DEG1YFL001W FMT1P32785 401 aa3.36□□□□□ -1.87
DEG1YFL001W UTP30P36144 274 aaKnown RBP3.36□□□□□ -1.87
DEG1YFL001W FIG1P38224 298 aa3.36□□□□□ -1.87
DEG1YFL001W CTR2P38865 189 aa3.36□□□□□ -1.87
DEG1YFL001W MRPL49P40858 161 aaPredicted RBP3.36□□□□□ -1.87
DEG1YFL001W SMD3P43321 101 aaKnown RBP3.36□□□□□ -1.87
DEG1YFL001W RPL9BP51401 191 aaKnown RBP3.36□□□□□ -1.87
DEG1YFL001W UBC12P52491 188 aa3.36□□□□□ -1.87
DEG1YFL001W YGR026WP53217 278 aa3.36□□□□□ -1.87
DEG1YFL001W CAB4P53332 305 aa3.36□□□□□ -1.87
DEG1YFL001W APJ1P53940 528 aa3.36□□□□□ -1.87
DEG1YFL001W YPR195CQ06594 109 aa3.36□□□□□ -1.87
DEG1YFL001W YLR036CQ07986 203 aa3.36□□□□□ -1.87
DEG1YFL001W YDL012CQ12489 107 aa3.36□□□□□ -1.87
DEG1YFL001W QCR2P07257 368 aa3.35□□□□□ -1.87
DEG1YFL001W PUT1P09368 476 aa3.35□□□□□ -1.87
DEG1YFL001W YLR156WP0CE96 114 aa3.35□□□□□ -1.87
DEG1YFL001W YLR159WP0CE97 114 aa3.35□□□□□ -1.87
DEG1YFL001W YLR161WP0CE98 114 aa3.35□□□□□ -1.87
DEG1YFL001W CNB1P25296 175 aa3.35□□□□□ -1.87
DEG1YFL001W YKR032WP36127 104 aa3.35□□□□□ -1.87
DEG1YFL001W AST2P39945 430 aaKnown RBP3.35□□□□□ -1.87
DEG1YFL001W SML1Q04964 104 aa3.35□□□□□ -1.87
DEG1YFL001W YPL162CQ12042 273 aa3.35□□□□□ -1.87
DEG1YFL001W YDL085C-AQ3E7B7 68 aaKnown RBP3.35□□□□□ -1.87
DEG1YFL001W YHR032W-AP0C5N6 59 aa3.34□□□□□ -1.87
DEG1YFL001W KRE1P17260 313 aa3.34□□□□□ -1.87
DEG1YFL001W GRX2P17695 143 aaKnown RBP3.34□□□□□ -1.87
DEG1YFL001W YKR041WP36134 250 aa3.34□□□□□ -1.87
DEG1YFL001W YGL204CP53089 101 aa3.34□□□□□ -1.87
DEG1YFL001W YDR249CQ03787 373 aa3.34□□□□□ -1.87
DEG1YFL001W TRM12Q04235 462 aa3.34□□□□□ -1.87
DEG1YFL001W DYN3Q04949 312 aa3.34□□□□□ -1.87
DEG1YFL001W AKR2Q12013 749 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms