RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W YML079WQ03629 201 aa1.3□□□□□ -2.2
SPC110YDR356W BET5Q03630 159 aa1.3□□□□□ -2.2
SPC110YDR356W YMR166CQ03829 368 aa1.3□□□□□ -2.2
SPC110YDR356W CTK1Q03957 528 aaKnown RBP1.3□□□□□ -2.2
SPC110YDR356W SFH1Q06168 426 aa1.3□□□□□ -2.2
SPC110YDR356W YDL218WQ07629 317 aa1.3□□□□□ -2.2
SPC110YDR356W PMD1P32634 1753 aa1.3□□□□□ -2.2
SPC110YDR356W ADH1P00330 348 aaKnown RBP1.3□□□□□ -2.2
SPC110YDR356W CPA1P07258 411 aaKnown RBP1.3□□□□□ -2.2
SPC110YDR356W CAP2P13517 287 aa1.3□□□□□ -2.2
SPC110YDR356W NUP1P20676 1076 aa1.3□□□□□ -2.2
SPC110YDR356W YGL010WP25338 174 aa1.3□□□□□ -2.2
SPC110YDR356W YCR099CP25657 155 aa1.3□□□□□ -2.2
SPC110YDR356W MF(ALPHA)2P32435 120 aa1.3□□□□□ -2.2
SPC110YDR356W GLC7P32598 312 aaKnown RBP1.3□□□□□ -2.2
SPC110YDR356W ALK2P32789 676 aaPredicted RBP1.3□□□□□ -2.2
SPC110YDR356W SHB17P36136 271 aaKnown RBP1.3□□□□□ -2.2
SPC110YDR356W NRG2P38082 220 aa1.3□□□□□ -2.2
SPC110YDR356W EHT1P38295 451 aa1.3□□□□□ -2.2
SPC110YDR356W TRS20P38334 175 aa1.3□□□□□ -2.2
SPC110YDR356W MTC4P38335 694 aaKnown RBP1.3□□□□□ -2.2
SPC110YDR356W SAY1P53324 424 aa1.3□□□□□ -2.2
SPC110YDR356W ELP3Q02908 557 aaKnown RBP1.3□□□□□ -2.2
SPC110YDR356W ROT1Q03691 256 aa1.3□□□□□ -2.2
SPC110YDR356W MIX14Q04341 121 aa1.3□□□□□ -2.2
SPC110YDR356W PFA4Q12006 378 aa1.3□□□□□ -2.2
SPC110YDR356W YPL245WQ12179 454 aaKnown RBP1.3□□□□□ -2.2
SPC110YDR356W PRR2Q12310 699 aa1.3□□□□□ -2.2
SPC110YDR356W ATG5Q12380 294 aa1.3□□□□□ -2.2
SPC110YDR356W TSC3Q3E790 80 aa1.3□□□□□ -2.2
SPC110YDR356W MYO1P08964 1928 aa1.29□□□□□ -2.2
SPC110YDR356W GCN1P33892 2672 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W COX2P00410 251 aa1.29□□□□□ -2.2
SPC110YDR356W COX3P00420 269 aa1.29□□□□□ -2.2
SPC110YDR356W RPS13P05756 151 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W YER039C-AP0CD97 72 aa1.29□□□□□ -2.2
SPC110YDR356W RPL40AP0CH08 128 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W RPL40BP0CH09 128 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W MRPL20P22354 195 aaPredicted RBP1.29□□□□□ -2.2
SPC110YDR356W TOM6P33448 61 aa1.29□□□□□ -2.2
SPC110YDR356W APS1P35181 156 aa1.29□□□□□ -2.2
SPC110YDR356W SDH4P37298 181 aa1.29□□□□□ -2.2
SPC110YDR356W YNL195CP40168 261 aa1.29□□□□□ -2.2
SPC110YDR356W YPL073CP40323 161 aa1.29□□□□□ -2.2
SPC110YDR356W EGT2P42835 1041 aa1.29□□□□□ -2.2
SPC110YDR356W DIE2P50076 525 aa1.29□□□□□ -2.2
SPC110YDR356W NIF3P53081 288 aa1.29□□□□□ -2.2
SPC110YDR356W YNL092WP53934 400 aa1.29□□□□□ -2.2
SPC110YDR356W KTR5P53966 522 aaPredicted RBP1.29□□□□□ -2.2
SPC110YDR356W SPR6Q01684 191 aa1.29□□□□□ -2.2
SPC110YDR356W PAL1Q05518 499 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W COA4Q05809 96 aa1.29□□□□□ -2.2
SPC110YDR356W SNT309Q06091 175 aaPredicted RBP1.29□□□□□ -2.2
SPC110YDR356W MCH1Q07376 486 aa1.29□□□□□ -2.2
SPC110YDR356W RRT7Q07829 113 aa1.29□□□□□ -2.2
SPC110YDR356W THP1Q08231 455 aa1.29□□□□□ -2.2
SPC110YDR356W YOR097CQ12274 175 aaPredicted RBP1.29□□□□□ -2.2
SPC110YDR356W VMA9Q3E7B6 73 aa1.29□□□□□ -2.2
SPC110YDR356W DET1Q99288 334 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W YFR010W-AP0C5N0 62 aa1.29□□□□□ -2.2
SPC110YDR356W LRE1P25579 583 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W CTS1P29029 562 aa1.29□□□□□ -2.2
SPC110YDR356W YET1P35723 206 aa1.29□□□□□ -2.2
SPC110YDR356W YBR062CP38239 180 aa1.29□□□□□ -2.2
SPC110YDR356W PEX7P39108 375 aa1.29□□□□□ -2.2
SPC110YDR356W SHO1P40073 367 aa1.29□□□□□ -2.2
SPC110YDR356W PRM5P40476 318 aa1.29□□□□□ -2.2
SPC110YDR356W SGN1P40561 250 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
SPC110YDR356W GON7P46984 123 aa1.29□□□□□ -2.2
SPC110YDR356W LCB3P47013 409 aa1.29□□□□□ -2.2
SPC110YDR356W AIM25P47140 327 aa1.29□□□□□ -2.2
SPC110YDR356W SNN1P48232 102 aa1.29□□□□□ -2.2
SPC110YDR356W RPL9BP51401 191 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W SCW4P53334 386 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W NRM1P53718 249 aa1.29□□□□□ -2.2
SPC110YDR356W YNR071CP53757 342 aa1.29□□□□□ -2.2
SPC110YDR356W CUZ1P53899 274 aa1.29□□□□□ -2.2
SPC110YDR356W RNH201P53942 307 aa1.29□□□□□ -2.2
SPC110YDR356W ACT1P60010 375 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W RHO4Q00246 291 aa1.29□□□□□ -2.2
SPC110YDR356W TY1A-DR2Q03964 440 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W YMR082CQ04276 118 aa1.29□□□□□ -2.2
SPC110YDR356W VBA1Q04301 562 aa1.29□□□□□ -2.2
SPC110YDR356W GRH1Q04410 372 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W TEN1Q07921 160 aa1.29□□□□□ -2.2
SPC110YDR356W IRC13Q08630 104 aa1.29□□□□□ -2.2
SPC110YDR356W DGA1Q08650 418 aa1.29□□□□□ -2.2
SPC110YDR356W TY1A-NL1Q12391 440 aaKnown RBP1.29□□□□□ -2.2
SPC110YDR356W YCR075W-AQ3E830 75 aa1.29□□□□□ -2.2
SPC110YDR356W AI5_ALPHAQ9ZZX1 630 aa1.29□□□□□ -2.2
SPC110YDR356W POR1P04840 283 aaKnown RBP1.28□□□□□ -2.2
SPC110YDR356W PAU19P0CE85 124 aa1.28□□□□□ -2.2
SPC110YDR356W PAU21P0CE86 164 aa1.28□□□□□ -2.2
SPC110YDR356W PAU22P0CE87 164 aa1.28□□□□□ -2.2
SPC110YDR356W RPL2AP0CX45 254 aaKnown RBP1.28□□□□□ -2.2
SPC110YDR356W RPL2BP0CX46 254 aaKnown RBP1.28□□□□□ -2.2
SPC110YDR356W INO4P13902 151 aa1.28□□□□□ -2.2
SPC110YDR356W PAU3P25610 124 aa1.28□□□□□ -2.2
SPC110YDR356W ERG24P32462 438 aaKnown RBP1.28□□□□□ -2.2
SPC110YDR356W SSS1P35179 80 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms