RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE3, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE3YDR288W YER134CP40081 178 aa2.2□□□□□ -2.06
NSE3YDR288W SKI6P46948 246 aaPredicted RBP2.2□□□□□ -2.06
NSE3YDR288W ARO8P53090 500 aaKnown RBP2.2□□□□□ -2.06
NSE3YDR288W YMR099CQ03161 297 aaKnown RBP2.2□□□□□ -2.06
NSE3YDR288W YMR295CQ03559 197 aa2.2□□□□□ -2.06
NSE3YDR288W TAH1P25638 111 aaPredicted RBP2.19□□□□□ -2.06
NSE3YDR288W MPC3P53311 146 aa2.19□□□□□ -2.06
NSE3YDR288W YHR007C-AQ07074 71 aa2.19□□□□□ -2.06
NSE3YDR288W YML100W-AQ8TGT0 57 aa2.19□□□□□ -2.06
NSE3YDR288W APA2P22108 325 aa2.18□□□□□ -2.06
NSE3YDR288W YJR111CP47148 283 aaKnown RBP2.18□□□□□ -2.06
NSE3YDR288W ARO80Q04052 950 aa2.18□□□□□ -2.06
NSE3YDR288W NOC4Q06512 552 aaPredicted RBP2.18□□□□□ -2.06
NSE3YDR288W YPR174CQ06616 221 aaPredicted RBP2.18□□□□□ -2.06
NSE3YDR288W YDL085C-AQ3E7B7 68 aaKnown RBP2.18□□□□□ -2.06
NSE3YDR288W YAR023CD6VPM8 179 aa2.17□□□□□ -2.06
NSE3YDR288W YPL073CP40323 161 aa2.17□□□□□ -2.06
NSE3YDR288W TMA22P47089 198 aaPredicted RBP2.17□□□□□ -2.06
NSE3YDR288W ADE1P27616 306 aa2.16□□□□□ -2.06
NSE3YDR288W SHG1P38337 142 aa2.16□□□□□ -2.06
NSE3YDR288W VMA22P38784 181 aa2.16□□□□□ -2.06
NSE3YDR288W MTW1P39731 289 aa2.16□□□□□ -2.06
NSE3YDR288W YER034WP40022 185 aaKnown RBP2.16□□□□□ -2.06
NSE3YDR288W UBC12P52491 188 aa2.16□□□□□ -2.06
NSE3YDR288W YPR014CQ6B0W2 109 aa2.15□□□□□ -2.07
NSE3YDR288W TDA4P47153 279 aa2.14□□□□□ -2.07
NSE3YDR288W SHH3Q04487 196 aa2.14□□□□□ -2.07
NSE3YDR288W IRC23Q08416 157 aa2.14□□□□□ -2.07
NSE3YDR288W MSB2P32334 1306 aa2.14□□□□□ -2.07
NSE3YDR288W NSP1P14907 823 aaKnown RBP2.13□□□□□ -2.07
NSE3YDR288W ATP7P30902 174 aa2.13□□□□□ -2.07
NSE3YDR288W AIM34Q03673 198 aa2.13□□□□□ -2.07
NSE3YDR288W GRX8Q05926 109 aa2.13□□□□□ -2.07
NSE3YDR288W YET3Q07451 203 aa2.13□□□□□ -2.07
NSE3YDR288W YNL146C-AQ3E7Z1 64 aa2.13□□□□□ -2.07
NSE3YDR288W YER076CP40049 302 aa2.12□□□□□ -2.07
NSE3YDR288W RIO2P40160 425 aaKnown RBP2.12□□□□□ -2.07
NSE3YDR288W CUP9P41817 306 aa2.12□□□□□ -2.07
NSE3YDR288W RCE1Q03530 315 aa2.12□□□□□ -2.07
NSE3YDR288W YMR315WQ04869 349 aaKnown RBP2.12□□□□□ -2.07
NSE3YDR288W RPS24AP0CX31 135 aaKnown RBP2.11□□□□□ -2.07
NSE3YDR288W RPS24BP0CX32 135 aaKnown RBP2.11□□□□□ -2.07
NSE3YDR288W MPA43P53583 542 aaPredicted RBP2.11□□□□□ -2.07
NSE3YDR288W NRK1P53915 240 aa2.11□□□□□ -2.07
NSE3YDR288W VPS71Q03433 280 aa2.11□□□□□ -2.07
NSE3YDR288W ATG38Q05789 226 aaKnown RBP2.11□□□□□ -2.07
NSE3YDR288W MDM35O60200 86 aa2.1□□□□□ -2.07
NSE3YDR288W MGT1P26188 188 aa2.1□□□□□ -2.07
NSE3YDR288W SNO1Q03144 224 aa2.1□□□□□ -2.07
NSE3YDR288W YOR342CQ12182 319 aa2.1□□□□□ -2.07
NSE3YDR288W PAM17P36147 197 aa2.09□□□□□ -2.07
NSE3YDR288W SEC72P39742 193 aaKnown RBP2.09□□□□□ -2.07
NSE3YDR288W UBC7Q02159 165 aa2.09□□□□□ -2.07
NSE3YDR288W PRP11Q07350 266 aaPredicted RBP2.09□□□□□ -2.07
NSE3YDR288W YPR013CQ12145 317 aa2.09□□□□□ -2.07
NSE3YDR288W TIR1P10863 254 aa2.08□□□□□ -2.08
NSE3YDR288W FMP32P43557 207 aa2.08□□□□□ -2.08
NSE3YDR288W PGA1P53896 198 aa2.08□□□□□ -2.08
NSE3YDR288W YMR253CQ04835 414 aa2.08□□□□□ -2.08
NSE3YDR288W SHH4Q06236 168 aa2.08□□□□□ -2.08
NSE3YDR288W NAT3Q06504 195 aa2.08□□□□□ -2.08
NSE3YDR288W BRX1Q08235 291 aaKnown RBP2.08□□□□□ -2.08
NSE3YDR288W GCY1P14065 312 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
NSE3YDR288W NSG1P38837 291 aa2.07□□□□□ -2.08
NSE3YDR288W EDC3P39998 551 aaKnown RBP2.07□□□□□ -2.08
NSE3YDR288W FLX1P40464 311 aa2.07□□□□□ -2.08
NSE3YDR288W YFL019CP43576 117 aa2.07□□□□□ -2.08
NSE3YDR288W MPD1Q12404 318 aaKnown RBP2.07□□□□□ -2.08
NSE3YDR288W SEC14P24280 304 aaKnown RBP2.06□□□□□ -2.08
NSE3YDR288W AHC2P25649 128 aa2.06□□□□□ -2.08
NSE3YDR288W FMP23P38231 175 aa2.06□□□□□ -2.08
NSE3YDR288W SPC25P40014 221 aa2.06□□□□□ -2.08
NSE3YDR288W DIG2Q03373 323 aaKnown RBP2.06□□□□□ -2.08
NSE3YDR288W UBR2Q07963 1872 aa2.05□□□□□ -2.08
NSE3YDR288W SFK1P35735 353 aa2.05□□□□□ -2.08
NSE3YDR288W YHL018WP38744 120 aaPredicted RBP2.05□□□□□ -2.08
NSE3YDR288W HYR1P40581 163 aaKnown RBP2.05□□□□□ -2.08
NSE3YDR288W GPI14P47088 403 aaKnown RBP2.05□□□□□ -2.08
NSE3YDR288W YAE1P47118 141 aaPredicted RBP2.05□□□□□ -2.08
NSE3YDR288W SBH1P52870 82 aa2.05□□□□□ -2.08
NSE3YDR288W YNL033WP53964 284 aa2.05□□□□□ -2.08
NSE3YDR288W DAD4P69851 72 aa2.05□□□□□ -2.08
NSE3YDR288W YLR412C-AQ3E742 68 aa2.05□□□□□ -2.08
NSE3YDR288W COX8P04039 78 aa2.04□□□□□ -2.08
NSE3YDR288W IDP1P21954 428 aaKnown RBP2.04□□□□□ -2.08
NSE3YDR288W GSP2P32836 220 aaKnown RBP2.04□□□□□ -2.08
NSE3YDR288W POG1P40473 351 aa2.04□□□□□ -2.08
NSE3YDR288W CWC27Q02770 301 aa2.04□□□□□ -2.08
NSE3YDR288W TRR1P29509 319 aaKnown RBP2.03□□□□□ -2.08
NSE3YDR288W ARO7P32178 256 aa2.03□□□□□ -2.08
NSE3YDR288W YNL247WP53852 767 aaKnown RBP2.03□□□□□ -2.08
NSE3YDR288W RNH202Q05635 350 aa2.03□□□□□ -2.08
NSE3YDR288W GRE1Q08969 168 aa2.03□□□□□ -2.08
NSE3YDR288W PHO85P17157 305 aa2.02□□□□□ -2.09
NSE3YDR288W YKL102CP34249 101 aa2.02□□□□□ -2.09
NSE3YDR288W NSA2P40078 261 aaKnown RBP2.02□□□□□ -2.09
NSE3YDR288W FIT2Q08906 153 aa2.02□□□□□ -2.09
NSE3YDR288W SAC3P46674 1301 aa2.01□□□□□ -2.09
NSE3YDR288W STP22P25604 385 aa2.01□□□□□ -2.09
NSE3YDR288W NVJ1P38881 321 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms