RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeastyeast

Gene DPB4, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB4YDR121W HMLALPHA1P0CY07 175 aa3.28□□□□□ -1.88
DPB4YDR121W ATR1P13090 542 aa3.28□□□□□ -1.88
DPB4YDR121W ATG22P25568 528 aa3.28□□□□□ -1.88
DPB4YDR121W TMA19P35691 167 aaKnown RBP3.28□□□□□ -1.88
DPB4YDR121W SDS24P38314 527 aa3.28□□□□□ -1.88
DPB4YDR121W WWM1P43582 211 aaKnown RBP3.28□□□□□ -1.88
DPB4YDR121W CGR1P53188 120 aa3.28□□□□□ -1.88
DPB4YDR121W SPG4Q04438 115 aa3.28□□□□□ -1.88
DPB4YDR121W YMR252CQ04814 134 aa3.28□□□□□ -1.88
DPB4YDR121W LIP2Q06005 328 aa3.28□□□□□ -1.88
DPB4YDR121W NMA1Q06178 401 aaKnown RBP3.28□□□□□ -1.88
DPB4YDR121W MRX9Q07349 420 aaKnown RBP3.28□□□□□ -1.88
DPB4YDR121W NDE2Q07500 545 aa3.28□□□□□ -1.88
DPB4YDR121W YOR186WQ08560 144 aa3.28□□□□□ -1.88
DPB4YDR121W BBP1Q12365 385 aa3.28□□□□□ -1.88
DPB4YDR121W TRP1P00912 224 aa3.27□□□□□ -1.89
DPB4YDR121W RPS8AP0CX39 200 aaKnown RBP3.27□□□□□ -1.89
DPB4YDR121W RPS8BP0CX40 200 aaKnown RBP3.27□□□□□ -1.89
DPB4YDR121W CPR1P14832 162 aaKnown RBP3.27□□□□□ -1.89
DPB4YDR121W IDP1P21954 428 aaKnown RBP3.27□□□□□ -1.89
DPB4YDR121W YCR043CP25361 127 aa3.27□□□□□ -1.89
DPB4YDR121W CBT1P36038 271 aaPredicted RBP3.27□□□□□ -1.89
DPB4YDR121W YJR056CP47115 236 aa3.27□□□□□ -1.89
DPB4YDR121W HCH1P53834 153 aa3.27□□□□□ -1.89
DPB4YDR121W MIX17Q03667 156 aa3.27□□□□□ -1.89
DPB4YDR121W GTO3Q04806 366 aa3.27□□□□□ -1.89
DPB4YDR121W UPS1Q05776 175 aa3.27□□□□□ -1.89
DPB4YDR121W PAM18Q07914 168 aa3.27□□□□□ -1.89
DPB4YDR121W YNL162W-AQ3E7A8 72 aa3.27□□□□□ -1.89
DPB4YDR121W CYC3P06182 269 aa3.26□□□□□ -1.89
DPB4YDR121W PIS1P06197 220 aaKnown RBP3.26□□□□□ -1.89
DPB4YDR121W YGL041W-AP0C5N3 154 aa3.26□□□□□ -1.89
DPB4YDR121W BGL2P15703 313 aaKnown RBP3.26□□□□□ -1.89
DPB4YDR121W PHO85P17157 305 aa3.26□□□□□ -1.89
DPB4YDR121W RPL16AP26784 199 aaKnown RBP3.26□□□□□ -1.89
DPB4YDR121W INO2P26798 304 aa3.26□□□□□ -1.89
DPB4YDR121W PEX4P29340 183 aa3.26□□□□□ -1.89
DPB4YDR121W AST1P35183 429 aa3.26□□□□□ -1.89
DPB4YDR121W AVT5P38176 459 aa3.26□□□□□ -1.89
DPB4YDR121W MDM31P38880 579 aa3.26□□□□□ -1.89
DPB4YDR121W SOP4P39543 234 aaPredicted RBP3.26□□□□□ -1.89
DPB4YDR121W DDI1P40087 428 aa3.26□□□□□ -1.89
DPB4YDR121W YIA6P40556 373 aa3.26□□□□□ -1.89
DPB4YDR121W TTI2P47168 421 aa3.26□□□□□ -1.89
DPB4YDR121W YGL204CP53089 101 aa3.26□□□□□ -1.89
DPB4YDR121W SCW4P53334 386 aaKnown RBP3.26□□□□□ -1.89
DPB4YDR121W PAU12P53343 120 aa3.26□□□□□ -1.89
DPB4YDR121W GIM3P53900 129 aa3.26□□□□□ -1.89
DPB4YDR121W HSK3P69852 69 aa3.26□□□□□ -1.89
DPB4YDR121W TDA1Q03533 586 aa3.26□□□□□ -1.89
DPB4YDR121W ERP1Q05359 219 aaKnown RBP3.26□□□□□ -1.89
DPB4YDR121W YLR283WQ05867 314 aa3.26□□□□□ -1.89
DPB4YDR121W SDO1Q07953 250 aaKnown RBP3.26□□□□□ -1.89
DPB4YDR121W YPL225WQ08971 146 aaKnown RBP3.26□□□□□ -1.89
DPB4YDR121W YGK3Q12222 375 aaPredicted RBP3.26□□□□□ -1.89
DPB4YDR121W SAL1D6W196 494 aa3.25□□□□□ -1.89
DPB4YDR121W ADK1P07170 222 aaKnown RBP3.25□□□□□ -1.89
DPB4YDR121W COX9P07255 59 aa3.25□□□□□ -1.89
DPB4YDR121W RPL31AP0C2H8 113 aaKnown RBP3.25□□□□□ -1.89
DPB4YDR121W MRP1P10662 321 aaKnown RBP3.25□□□□□ -1.89
DPB4YDR121W DPB2P24482 689 aaPredicted RBP3.25□□□□□ -1.89
DPB4YDR121W YKL063CP35725 167 aa3.25□□□□□ -1.89
DPB4YDR121W PRS4P38063 326 aaPredicted RBP3.25□□□□□ -1.89
DPB4YDR121W PAU24P38155 120 aa3.25□□□□□ -1.89
DPB4YDR121W PRS2P38620 318 aaKnown RBP3.25□□□□□ -1.89
DPB4YDR121W YLR281CQ05863 155 aa3.25□□□□□ -1.89
DPB4YDR121W PEX30Q06169 523 aa3.25□□□□□ -1.89
DPB4YDR121W MSH5Q12175 901 aa3.25□□□□□ -1.89
DPB4YDR121W YOR192C-CQ3E736 78 aa3.25□□□□□ -1.89
DPB4YDR121W ATG40Q99325 256 aa3.25□□□□□ -1.89
DPB4YDR121W YHR212W-AP0CX91 67 aa3.24□□□□□ -1.89
DPB4YDR121W RPL16BP26785 198 aaKnown RBP3.24□□□□□ -1.89
DPB4YDR121W FUN26P31381 517 aa3.24□□□□□ -1.89
DPB4YDR121W AUA1P32450 94 aa3.24□□□□□ -1.89
DPB4YDR121W SNC2P33328 115 aa3.24□□□□□ -1.89
DPB4YDR121W CPR5P35176 225 aa3.24□□□□□ -1.89
DPB4YDR121W RCN1P36054 211 aa3.24□□□□□ -1.89
DPB4YDR121W ECM31P38122 312 aa3.24□□□□□ -1.89
DPB4YDR121W YPC1P38298 316 aa3.24□□□□□ -1.89
DPB4YDR121W YFL067WP43537 175 aa3.24□□□□□ -1.89
DPB4YDR121W HIT1P46973 164 aa3.24□□□□□ -1.89
DPB4YDR121W VPS55P47111 140 aa3.24□□□□□ -1.89
DPB4YDR121W MST27P53176 234 aa3.24□□□□□ -1.89
DPB4YDR121W CPD1P53314 239 aa3.24□□□□□ -1.89
DPB4YDR121W MRPL50P53724 139 aa3.24□□□□□ -1.89
DPB4YDR121W VBA1Q04301 562 aa3.24□□□□□ -1.89
DPB4YDR121W YOL118CQ08259 102 aa3.24□□□□□ -1.89
DPB4YDR121W HTZ1Q12692 134 aaKnown RBP3.24□□□□□ -1.89
DPB4YDR121W RPL23AP0CX41 137 aaKnown RBP3.23□□□□□ -1.89
DPB4YDR121W RPL23BP0CX42 137 aaKnown RBP3.23□□□□□ -1.89
DPB4YDR121W ERG2P32352 222 aa3.23□□□□□ -1.89
DPB4YDR121W VMA6P32366 345 aaKnown RBP3.23□□□□□ -1.89
DPB4YDR121W ERG24P32462 438 aaKnown RBP3.23□□□□□ -1.89
DPB4YDR121W AGA2P32781 87 aa3.23□□□□□ -1.89
DPB4YDR121W YRA2P36036 203 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
DPB4YDR121W ECM4P36156 370 aa3.23□□□□□ -1.89
DPB4YDR121W SWD3P38123 315 aa3.23□□□□□ -1.89
DPB4YDR121W UMP1P38293 148 aa3.23□□□□□ -1.89
DPB4YDR121W CCS1P40202 249 aaKnown RBP3.23□□□□□ -1.89
DPB4YDR121W PRM5P40476 318 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms