RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	ATO3	Q12359	275 aa		4.58	□□□□□ -1.68
DBF4	YDR052C	ORT1	Q12375	292 aa		4.58	□□□□□ -1.68
DBF4	YDR052C	YER039C-A	P0CD97	72 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	GAR1	P28007	205 aa	Known RBP	4.57	□□□□□ -1.68
DBF4	YDR052C	NUD1	P32336	851 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	GEX2	P36173	615 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	TEM1	P38987	245 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	YEA4	P40004	342 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	MSL1	P40567	111 aa	Predicted RBP	4.57	□□□□□ -1.68
DBF4	YDR052C	YFL054C	P43549	646 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	YMR074C	Q04773	145 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	IES4	Q08561	116 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	POC4	Q12245	148 aa	Predicted RBP	4.57	□□□□□ -1.68
DBF4	YDR052C	YLR415C	O13578	112 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	DED1	P06634	604 aa	Known RBP	4.57	□□□□□ -1.68
DBF4	YDR052C	RPS28B	P0C0X0	67 aa	Known RBP	4.57	□□□□□ -1.68
DBF4	YDR052C	NPR1	P22211	790 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	TRX3	P25372	127 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	PRE2	P30656	287 aa	Known RBP	4.57	□□□□□ -1.68
DBF4	YDR052C	MSS51	P32335	436 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	UME6	P39001	836 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	SDP1	P40479	209 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	ATG21	Q02887	496 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	ENV9	Q08651	330 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.57	□□□□□ -1.68
DBF4	YDR052C	YCL012C	Q8J0M4	134 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	ODC2	Q99297	307 aa		4.57	□□□□□ -1.68
DBF4	YDR052C	YPT1	P01123	206 aa	Known RBP	4.56	□□□□□ -1.68
DBF4	YDR052C	YBR121C-A	P0C5L4	52 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	HMRA1	P0CY11	126 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	POX1	P13711	748 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	FCY2	P17064	533 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	GLN3	P18494	730 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	INM1	P38710	295 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	YHL026C	P38740	315 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	SCS3	P53012	380 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	YIP1	P53039	248 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	CAB4	P53332	305 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	SLG1	P54867	378 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	TRI1	Q05024	226 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	YTH1	Q06102	208 aa	Predicted RBP	4.56	□□□□□ -1.68
DBF4	YDR052C	YRA1	Q12159	226 aa	Known RBP	4.56	□□□□□ -1.68
DBF4	YDR052C	YIL102C-A	Q2V2P5	75 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	YDL007C-A	Q2V2Q0	85 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	YOR338W	Q99326	363 aa		4.56	□□□□□ -1.68
DBF4	YDR052C	PAU1	P0CE88	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	PAU14	P0CE89	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	PAU6	P0CE90	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	PAU18	P0CE91	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	PAU8	P0CE92	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	PAU11	P0CE93	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	URA5	P13298	226 aa	Known RBP	4.55	□□□□□ -1.68
DBF4	YDR052C	YGL010W	P25338	174 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	YKL071W	P36086	256 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	YKR070W	P36151	352 aa	Known RBP	4.55	□□□□□ -1.68
DBF4	YDR052C	ADH5	P38113	351 aa	Known RBP	4.55	□□□□□ -1.68
DBF4	YDR052C	PAU13	P38725	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	RPB11	P38902	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	HIT1	P46973	164 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	PAU4	P53427	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	TIM10	P87108	93 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	RPL21A	Q02753	160 aa	Known RBP	4.55	□□□□□ -1.68
DBF4	YDR052C	PAU10	Q03050	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	YMR206W	Q03695	313 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	GRH1	Q04410	372 aa	Known RBP	4.55	□□□□□ -1.68
DBF4	YDR052C	SYM1	Q06563	197 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	PAU20	Q08322	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	SME1	Q12330	94 aa	Predicted RBP	4.55	□□□□□ -1.68
DBF4	YDR052C	RPL21B	Q12672	160 aa	Known RBP	4.55	□□□□□ -1.68
DBF4	YDR052C	PAU9	Q3E770	120 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	RPL7A	P05737	244 aa	Known RBP	4.55	□□□□□ -1.68
DBF4	YDR052C	MKK2	P32491	506 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	TRM7	P38238	310 aa	Known RBP	4.55	□□□□□ -1.68
DBF4	YDR052C	ATX1	P38636	73 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	RPS20	P38701	121 aa	Known RBP	4.55	□□□□□ -1.68
DBF4	YDR052C	SAS2	P40963	338 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	AZF1	P41696	914 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
DBF4	YDR052C	XPT1	P47165	209 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	YNR048W	P53740	393 aa		4.55	□□□□□ -1.68
DBF4	YDR052C	IDH2	P28241	369 aa	Known RBP	4.54	□□□□□ -1.68
DBF4	YDR052C	TRR1	P29509	319 aa	Known RBP	4.54	□□□□□ -1.68
DBF4	YDR052C	MKK1	P32490	508 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	IXR1	P33417	597 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	YBR292C	P38357	123 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	MTC3	P53077	123 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	MRPL1	Q04599	285 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	ARC18	Q05933	178 aa	Known RBP	4.54	□□□□□ -1.68
DBF4	YDR052C	ATG33	Q06485	197 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	JID1	Q12350	301 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	COX9	P07255	59 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	MTC7	P32633	139 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	MAC1	P35192	417 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	SAP30	P38429	201 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	YJL213W	P40896	331 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	OST2	P46964	130 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	YJR124C	P47159	448 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	NCE103	P53615	221 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	STP3	Q05937	343 aa		4.54	□□□□□ -1.68
DBF4	YDR052C	MRPL20	P22354	195 aa	Predicted RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 1049.2 ms